Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_021786.1 Length=9499 Score E Sequences producing significant alignments: (Bits) Value seq33068 109 3e-20 >seq33068 Length=655 Score = 109 bits (120), Expect = 3e-20 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 1876 CTGGAGATTCAAAGTACTTAGACTTACCAACAGGAAAGGGTGATCGCATGTACATTACGA 1935 |||| ||| |||||||| | || | ||| || ||| || || ||||| || | | Sbjct 259 CTGGTGATCCAAAGTACATTGATCTGCCAGCATCTGAGGCAGAACGTATGTATATAGCAA 318 Query 1936 AGGAAGGATATTGCTACATGAATATTTTCCTGGCTATGCTCGTAAATGTTGAAAAGGATA 1995 ||||||| |||||||| | ||||||||||| || ||||| ||||||||| | || | Sbjct 319 AGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACG 378 Query 1996 AAGCCAAGGATTTCACAAAATGGGTTCGTGACACAATTGTAACACA-GCTAGGTCAATGG 2054 |||| ||||||||||| ||| | ||||||| ||| | || ||| || || ||| Sbjct 379 AAGCAAAGGATTTCACCAAAATGATTCGTGA-TGTTTTGATCCCCATGCTTGGGCAGTGG 437 Query 2055 CCAACAATCACGGATGTTGCAATTGCA 2081 || || | | ||||||||||| |||| Sbjct 438 CCTTCATTGATGGATGTTGCAACTGCA 464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30269062054928