Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_023175.1 Length=10346 Score E Sequences producing significant alignments: (Bits) Value seq33068 131 1e-26 >seq33068 Length=655 Score = 131 bits (144), Expect = 1e-26 Identities = 308/460 (67%), Gaps = 4/460 (1%) Strand=Plus/Plus Query 2612 TGTAGTTGTGTCACCCTTGATGATGGCACACCTGCGACCAGTGAGCTCAAGACTCCAACC 2671 ||| | ||||| || | |||||||| || || | | ||||| |||| || || Sbjct 174 TGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTTAAGAGCCCGACG 233 Query 2672 AAGAATCATCTTGTTCTCGGGAACTCTGGGGATGCAAAGTACGTTGATTTACCGACCCTT 2731 |||| ||||| ||| | || ||||| ||| |||||||| ||||| | || | | Sbjct 234 AAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCAGCATCT 293 Query 2732 GAAGTTGATTCAATGTTCATAGCAAAGGAAGGCTACTGTTACATGAATATATTCTTAGCA 2791 || | || |||| |||||||||||||| || || || | ||||| ||| | ||| Sbjct 294 GAGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCA 353 Query 2792 ATGCTAGTGAACATACCCGAGGGAGAGGCAAAAGATTTTACGAAAAGAGTCCGAGATCTT 2851 ||||| || || | ||| || ||||| ||||| || |||| | || ||| || Sbjct 354 ATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTCGTGATGTT 413 Query 2852 GTTGGT-GCAAAGCTTGGACAATGGCCAACCATGTTAGACGTAGCAACTTGCGCAAACCA 2910 ||| | | | |||||| || ||||| | || | || || |||||| ||| | Sbjct 414 -TTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCAGCATATAT 472 Query 2911 ATTAGTGATATTTCATCCAGATGCTGCAAGTGCTGAGCTACCGCGAATTCTTGTTGATCA 2970 ||| |||| ||||| || | | | ||||| |||| | || |||||||| || Sbjct 473 TCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATCCTTGTTGACCA 532 Query 2971 -TAAACACAAGGTTATGCATGTAATGGATTCTTTCGGATCTGTTGATTCTGGATACCACA 3029 |||||| |||||||| || ||||||| ||||| | | ||| || ||| Sbjct 533 CGCTACACAA-ACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTGGGTATCACG 591 Query 3030 TTCTCAAAGCGAACACTGTCAATCAATTAATTCAATTTGC 3069 | ||||| || ||||||||||| |||||||||||||| Sbjct 592 TGCTCAAGGCCGGAACTGTCAATCATTTAATTCAATTTGC 631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32978339827360