Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_025821.1 Length=9741 Score E Sequences producing significant alignments: (Bits) Value seq33068 129 4e-26 >seq33068 Length=655 Score = 129 bits (142), Expect = 4e-26 Identities = 243/353 (69%), Gaps = 6/353 (2%) Strand=Plus/Plus Query 2097 CTGGTGATGCTAAGTATATAGACTTACCTGAGCAG--GAGAATGAACGATTGTACATATC 2154 |||||||| | ||||| || || | || |||| ||| ||||| |||| ||| | Sbjct 259 CTGGTGATCCAAAGTACATTGATCTGCC--AGCATCTGAGGCAGAACGTATGTATATAGC 316 Query 2155 ACAAGAAGGGTATTGTTATGTAAATGTATTCTTAGCAATGTTGGTGAACGTCAACGAGGA 2214 | | ||||| ||||| ||| | ||| | ||| | |||||| | || || || || ||| | Sbjct 317 AAAGGAAGGTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAA 376 Query 2215 TGATGCCAAGAATTTCACAAAGATTGTACGTGACGATGTGGTCAGGAAGCTTGGGAAGTG 2274 || || ||| ||||||| || || | ||||| | | || || | ||||||| |||| Sbjct 377 CGAAGCAAAGGATTTCACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTG 436 Query 2275 GCCGACACTGATAGATTTAGCAACTGCTTGCTATTATCTCACAATGTTTTTCCCAGAAAC 2334 ||| || |||| ||| | |||||||| ||| ||| | || || ||||| Sbjct 437 GCCTTCATTGATGGATGTTGCAACTGCAGCATATATTCTAGGCGTATTCCATCCTGAAAC 496 Query 2335 ACGAAATGCAGAATTACCTAGAATTCTGGTTGATCATAA-ACACAACACGATGCATGTCA 2393 ||| || |||||||| || || || ||||| || |||||| || |||||||||| Sbjct 497 GCGATGCGCTGAATTACCCAGGATCCTTGTTGACCACGCTACACAA-ACCATGCATGTCA 555 Query 2394 TTGATGCATATGGTTCAAAGAACACAGGATATCACATTTTGAAGGCAGGAACT 2446 ||||| | ||||| ||| | || |||||| | | ||||| |||||| Sbjct 556 TTGATTCTTATGGATCACTAACTGTTGGGTATCACGTGCTCAAGGCCGGAACT 608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31043141418480