Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_026615.1 Length=9720 Score E Sequences producing significant alignments: (Bits) Value seq33068 161 6e-36 >seq33068 Length=655 Score = 161 bits (178), Expect = 6e-36 Identities = 299/436 (69%), Gaps = 6/436 (1%) Strand=Plus/Plus Query 1982 ACTCTTGCTGTTGTGTCACTCTGGATGATGGAAAGCCATTGACGTCTGATGTCAAAACAC 2041 |||| || || ||||| || |||||||||||| || || || || | || | | Sbjct 169 ACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACTCCGAGCTTAAGAGCC 228 Query 2042 CAACAAAGAGACATTTAGTGGTTGGTAATTCTGGTGATGCAAAATTCATTGATTTACCAG 2101 | || ||||| ||| |||| | || |||||||||| |||| | ||||||| | |||| Sbjct 229 CGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGCCAG 288 Query 2102 AAGTTCTGAATGCAG---GAATGTACATTGCTAAGGAAGGTTATTGCTACATGAACATAT 2158 | |||| | |||| | ||||| || || ||||||||||||||||| | || || | Sbjct 289 CA--TCTG-AGGCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATTT 345 Query 2159 TCTTAGCAATGTTGGTGAATGTTAATGAAGCTGAAGCAAAAGACTTCACAAAATTTGTTA 2218 || | |||||| | || ||||||||||| |||||||| || ||||| ||| | || Sbjct 346 TCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATTC 405 Query 2219 GAGACACAATTGTCCCTAAACTTGGAAAGTGGCCCAAAATGATTGATGTCGCTACAGCAT 2278 | || | |||| | ||||| ||||||| | |||| ||||| || || ||| Sbjct 406 GTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCAG 465 Query 2279 GTTACATGCTGCGCGTGCTATATCCAGATGTGCACAATGCAGAACTACCCAGAATACTTG 2338 || || || |||| | |||| || || || ||| ||||||| || |||| Sbjct 466 CATATATTCTAGGCGTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATCCTTG 525 Query 2339 TTGATCATGAGAATGAGACAATGCACGTACTCGATTCATATGGTTCTCTATCAACTGGAT 2398 |||| || | | | || ||||| || | ||||| ||||| || ||| | ||| | Sbjct 526 TTGACCACGCTACACAAACCATGCATGTCATTGATTCTTATGGATCACTAACTGTTGGGT 585 Query 2399 ATCATGTGCTGAAAGC 2414 |||| ||||| || || Sbjct 586 ATCACGTGCTCAAGGC 601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30975969242304