Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_030118.1 Length=9896 Score E Sequences producing significant alignments: (Bits) Value seq33068 104 1e-18 >seq33068 Length=655 Score = 104 bits (114), Expect = 1e-18 Identities = 216/316 (68%), Gaps = 12/316 (4%) Strand=Plus/Plus Query 2056 AGAATGGTAATTTTGTGTACCCGTGTTGCTGTACTACACTTGAAGATGGAACAGCCATTG 2115 ||||||| |||| | | || | ||||||||| || | || |||||||| | || Sbjct 151 AGAATGGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGT 210 Query 2116 AATCCACAGTATATGCACCT-ACCAAGAAGCATATAGTCATAGGAAACACAGGTGACACA 2174 | ||| || || | || || |||| |||| |||| |||||| | ||||| || Sbjct 211 ACTCCG-AGCTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCA 269 Query 2175 AAGTTTGTTGATCTACCAAA----GGGGGA-AACGGATATGCTATACATCGCAAAAGAAG 2229 |||| ||||||| ||| | || | |||| |||| || || ||||| |||| Sbjct 270 AAGTACATTGATCTGCCAGCATCTGAGGCAGAACG--TATG---TATATAGCAAAGGAAG 324 Query 2230 GATATTGTTACATCAATGTTTTTCTAGCATTGTTAATCAATATCAGAGAGGATGAAGCAA 2289 | ||||| || ||||| |||| || ||| || | | ||| | | ||| | ||||||| Sbjct 325 GTTATTGCTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAA 384 Query 2290 AGGACTTCACCAAGAAAGTTAGAGACATATTCGTTCCCAAGCTTGGGACATGGCCATCCT 2349 |||| |||||||| | || | || | || | |||| ||||||| ||||| || | Sbjct 385 AGGATTTCACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCAT 444 Query 2350 TGATGGATTTAGCAAC 2365 |||||||| | ||||| Sbjct 445 TGATGGATGTTGCAAC 460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31538936052160