Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_030391.1 Length=9369 Score E Sequences producing significant alignments: (Bits) Value seq33068 131 1e-26 >seq33068 Length=655 Score = 131 bits (144), Expect = 1e-26 Identities = 316/468 (68%), Gaps = 14/468 (3%) Strand=Plus/Plus Query 1657 CACTCATGTTGTTGTGTGACAAATGAATCAGGTGAGCCTC--TGTTATCTAGCCTCAAAA 1714 ||||||||||| ||||| || ||| || | | || || | ||| || || || | Sbjct 168 CACTCATGTTGCTGTGTAAC-GATGGATGATG-GAACCCCGATGTACTCCGAGCTTAAGA 225 Query 1715 TGCCAACGAAACACCACCTAGTTATTGGAAACAGTGGCGATCCAAAATACGTGGACTTAC 1774 || ||||| || |||||||| ||| ||| |||||||| ||| | || | | Sbjct 226 GCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGTACATTGATCTGC 285 Query 1775 CAACAGATGAGAGCAAGAAG-ATGTATATTGCGAAGGATGGATATTGTTATATTAACATT 1833 || || |||| ||| | | |||||||| || ||||| || ||||| ||| | || ||| Sbjct 286 CAGCATCTGAG-GCAGAACGTATGTATATAGCAAAGGAAGGTTATTGCTATCTCAATATT 344 Query 1834 TTCTTGGCCATGCTGGTCAATGTCAATGAATCTGAAGCAAAGACTTTCACAAAGATGGTA 1893 ||| | || ||||| || ||||| ||||| ||||||||| |||||| || ||| | Sbjct 345 TTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTTCACCAAAATGATT 404 Query 1894 CGAGACGTGATAATGGACAAATTGGGAAAATGGCCATCACTCCTTGACGTTGCCA---CA 1950 || || || | || || | || | ||||| ||| | | || ||||| | || Sbjct 405 CGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGATGTTGCAACTGCA 464 Query 1951 GCTTGTTGCCTACTCAAATTTTTCTTTCCTGATGTGAGTGGAGCAGAATTGCCCAGAATG 2010 || | | ||| | | ||| |||||| | | | || ||||| ||||| || Sbjct 465 GCATATATTCTAGGC---GTATTCCATCCTGAAACGCGATGCGCTGAATTACCCAGGATC 521 Query 2011 CTAGTGGATCAC-CAACACAAAACGATACACGTCATAGATTCTTATGGATCCATGACCAC 2069 || || || ||| | |||| |||| || || ||||| |||||||||||||| | || Sbjct 522 CTTGTTGACCACGCTACAC-AAACCATGCATGTCATTGATTCTTATGGATCACTAACTGT 580 Query 2070 GGGTTACCACGTGCTCAAGACCAATACGGTCGAGCAATTGATTAAATT 2117 || || |||||||||||| || || ||| | || || ||| |||| Sbjct 581 TGGGTATCACGTGCTCAAGGCCGGAACTGTCAATCATTTAATTCAATT 628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29853234297648