Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_031339.1 Length=10154 Score E Sequences producing significant alignments: (Bits) Value seq33068 116 2e-22 >seq33068 Length=655 Score = 116 bits (128), Expect = 2e-22 Identities = 285/425 (67%), Gaps = 14/425 (3%) Strand=Plus/Plus Query 1963 ATGGAAATTTTATTTATCCATGTTGCTGTGTAACAAATGAGGACGGGACACCACAATACT 2022 ||||||||| ||| | |||||||||||||||| | || || || || || |||| Sbjct 154 ATGGAAATTATATACACTCATGTTGCTGTGTAACGATGGATGATGGAACCCCGATGTACT 213 Query 2023 CAGAAGTGTACATGCCAACACAAAGACATTTGAAAATTGGCAACACGGGTGATACGAAGT 2082 | || | | | || || | || ||| | || || | |||||| | |||| Sbjct 214 CCGAGCTTAAGAGCCCGACGAAGAGGCATCTAGTTATAGGAGCTTCTGGTGATCCAAAGT 273 Query 2083 TAGTTGATTTACCAGCAAATGAGAGGGAGAAATTATTCATAA--CAAAAGATGGATATTG 2140 ||||| | |||||| |||| | |||| ||| ||| |||| || || ||||| Sbjct 274 ACATTGATCTGCCAGCATCTGAG--GCAGAACGTATGTATATAGCAAAGGAAGGTTATTG 331 Query 2141 TTATGTTAATATTTTCCTTGCAATGCTTGTCAACGTTCCAGAGGTAAATGCAAAGAACTT 2200 ||| | ||||||||||| ||||||||||| || ||| ||| | |||||| | || Sbjct 332 CTATCTCAATATTTTCCTCGCAATGCTTGTAAATGTTAATGAGAACGAAGCAAAGGATTT 391 Query 2201 CACAAAAATGGTTAGAGATGTAGTTATTTCTGAACTTGGACAGTGGCCGTCGATGATGGA 2260 ||| |||||| || | ||||| | || | ||||| |||||||| || ||||||| Sbjct 392 CACCAAAATGATTCGTGATGTTTTGATCCCCATGCTTGGGCAGTGGCCTTCATTGATGGA 451 Query 2261 TATCGCATCTTTTTGC--CATATGCT-TACACTGTTTTTC--CCAGACACTGCATCAGCA 2315 | | ||| | ||| ||||| | || | || || | || || || || || Sbjct 452 TGTTGCAAC----TGCAGCATATATTCTAGGC-GTATTCCATCCTGAAACGCGATGCGCT 506 Query 2316 GAATTACCAAGAATTTTGGTTGACCATAAAACGCAAACGATGCATGTGTTAGATTCATAC 2375 |||||||| || || | |||||||| || ||||| |||||||| | ||||| || Sbjct 507 GAATTACCCAGGATCCTTGTTGACCACGCTACACAAACCATGCATGTCATTGATTCTTAT 566 Query 2376 GGCTC 2380 || || Sbjct 567 GGATC 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32364194216608