Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_025382.1 Length=13534 Score E Sequences producing significant alignments: (Bits) Value seq467 111 1e-20 >seq467 Length=3082282 Score = 111 bits (122), Expect = 1e-20 Identities = 350/541 (65%), Gaps = 6/541 (1%) Strand=Plus/Plus Query 5183 TGATTATGCTCAATTTAGATATGAGCAGAATTTCATCATCCGACAGATCAATAAGAATTT 5242 ||||||||| ||||| || ||||| || ||||| || ||| || ||||||||||| Sbjct 56839 TGATTATGCACAATTCAGGTATGAACAAAATTTTGTCGCTAAACAAATTAATAAGAATTT 56898 Query 5243 TGGATTATTACAGAAGAGCATTTGTGATATTCAGTTTTCTAAGTGGCAGAATCTCAGTCC 5302 ||| | | ||||| ||||| ||||| || || | | || ||||| ||||| ||| Sbjct 56899 TGGTTAGCTCCAGAAAAGCATCTGTGACATACAATATCAAAAATGGCAAAATCTACATCC 56958 Query 5303 ACCCAATCTTGCTATGAAAATTGCCCATTATGTCACCGGCTCTATCCACTCTATAGGTGG 5362 ||| ||| | || |||| | || || ||| |||| || || || || | ||| | | Sbjct 56959 ACCTAATTTGGCATTGAAGGTGGCTCAATATATCACTGGATCCATTCATTGTATTGAAAG 57018 Query 5363 TGTTCATCATGGATCTTATTCAATTCAAAGAACGGAAAAATCCATTACTAAGGTCAATCT 5422 |||| | | ||| || | ||||| || || || | ||| | | || Sbjct 57019 CTCTCATTTTAATGCCTATGCAGTACAAAGGACTGAGCTTTCTGTAACTCTTATTGAACT 57078 Query 5423 GGTGTTTCCCATTGTTATTGTTCATGGAATGTATAAGTGCCAAAGGGAACCATCCAAGGA 5482 ||||| ||||| ||| |||| ||||| || | || |||| | || || Sbjct 57079 ACATTTTCCTATTGTAGTTGAGCATGAAATGT-TA-----TACAGACAACCTTATAAAGA 57132 Query 5483 GGTGGTTTGGGCAGAACCCGTCACAGGGATCTTATTCAAGTCTCCTATTCCGACTCATTT 5542 ||| | | || ||||| || ||||| || ||||| || ||| | |||||||| Sbjct 57133 GGTTATATAGGTTGAACCAGTAACAGGAATTTTATTTAAAGATCCACTAATTACTCATTT 57192 Query 5543 CTCACTAAGTTCCTCTTGGCTACCTGGGGTAAATGGTTCTTCTATTGTCCCTCTGACAGG 5602 || | ||| | | ||||| | || ||| || ||| | ||| | ||||| || || Sbjct 57193 TTCTTTGAGTGCTACATGGCTGCGAGGAAAAAACGGATCTGCAATTATTCCTCTAACTGG 57252 Query 5603 TCAAATTCTTCTCCCTGAAATCACAATGGATCACTTGGAGGTTGTACAACAGGTTGAAGC 5662 ||| | |||| |||||||| || | | || ||||| || |||| | |||| Sbjct 57253 TCAGGTAATTCTTCCTGAAATTACTTTAAACCATTTGGAAATTAATAAACAATCTAAAGC 57312 Query 5663 AAAGATGGTCAAAAGTATGTACACGAATGTAGAGTTGTTTGGATCAACAGAGGAATTTCA 5722 ||| || | ||| | |||| |||| || || || ||||| | || |||||||| Sbjct 57313 AAAATCAGTTATTAGTCTATACAGCAATGCGGAATTATTGGGATCCTCTGAAGAATTTCA 57372 Query 5723 A 5723 | Sbjct 57373 A 57373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 43175429815947