Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_031320.1 Length=6421 Score E Sequences producing significant alignments: (Bits) Value seq6539 95.1 5e-16 seq888 95.1 5e-16 seq11931 84.2 9e-13 >seq6539 Length=103002 Score = 95.1 bits (104), Expect = 5e-16 Identities = 215/320 (67%), Gaps = 4/320 (1%) Strand=Plus/Minus Query 2809 TGAGGATGGTGGACTAAGAGTGGACTTATTCAAAAAGAATCAGCACGGGGGTCTGAGAGA 2868 ||| || || || || |||| ||| | | ||| || ||||||||||| || ||| | || Sbjct 11069 TGACGACGGAGGGCTGCGAGTTGACATCTGCAAGAAAAATCAGCACGGCGGACTGCGTGA 11010 Query 2869 AATCTATGTCATGGAGATCCATTCGCGAATAGTGCAACTCGTGGTTGAAGAGATATCGAG 2928 ||| || | | || | || ||||| |||| | | | || || || | | Sbjct 11009 AATTTACATTTTAGAATTAAGATCACGAATTTTGCAGTTGATTCTAGAGGAAATTGCCCG 10950 Query 2929 GGCATTGTGCCAAGAGCTGGATATAGAGATGATGATGCACCCCGGCAACAAGCTGAGGAA 2988 || | || || || || ||| ||||||||||||||||| | | || || || Sbjct 10949 AGCCATCTGTCAGGATGTGCCTATCGAGATGATGATGCACCCAGAGAGTAAAATGGTGAT 10890 Query 2989 GCCGCAAGAGCACATGTACAAATCTGCAA-GAAGAACTAGTCCA-TATAAGGTCAACATA 3046 |||||| ||||||||| | |||| | ||| || || | | || || || ||| Sbjct 10889 GCCGCAGTCACACATGTACGAGGCTGCGACGAAAAA--AGCCAAATACAAACAAAATATA 10832 Query 3047 AGCAGCTCCAATGATGCTAAGGTCTGGAATCAAGGCCATCATGTCGCGAAGTTCGCTCAG 3106 |||| ||||| || || ||||| ||||| || || || ||||| |||| ||||||||| Sbjct 10831 TGCAGTTCCAACGACGCCAAGGTGTGGAACCAGGGTCACCATGTGACGAAATTCGCTCAG 10772 Query 3107 TTTCTTGTAAGACTGCTGCC 3126 ||| | | || ||||||| Sbjct 10771 TTTTTGATTCGAGTGCTGCC 10752 Score = 87.8 bits (96), Expect = 7e-14 Identities = 245/371 (66%), Gaps = 10/371 (3%) Strand=Plus/Minus Query 3457 AGATTTGGTCAGTTCTGATGACTCATCAAGAATGACAGATGTGTTTTCCTCAGACGA--- 3513 |||| ||||||| || || |||||||| ||| | || || || || ||| ||||| Sbjct 10424 AGATATGGTCAGCTCCGACGACTCATCCAGACTCACTGACGTCTTCTCC---GACGACCT 10368 Query 3514 -AGCTTTCTTTAGGAGATCAGTTTGTGTGGCTAAAGC-CGATCATTTGGTGATAAAGACC 3571 ||| |||| ||| |||| || | ||||| |||||| | | || ||| | Sbjct 10367 GAGCAA-CTTTGCGAGCGCAGTCGCCCTGAC-AAAGCTCGATCACATCGCAATCAAGTAC 10310 Query 3572 CTGTCACCTTTGATGGGGATTAGTCTATCACCGAAGAGCACTCTGTGCTCTAATGGTGTG 3631 | ||||| || || || | |||| || ||||| || ||||| ||| ||||| Sbjct 10309 TTTTCACCGATGTACGGCATCTGGATATCCCCAAAGAGTACCATGTGCACTAGCGGTGTC 10250 Query 3632 ATGGAGTTTAATTCAGAGTTTTTCTTCAGAGCCAGTGTCTTCCGCCCAACATTGAAGTGG 3691 | || || ||||| ||||||| ||| | | | ||||||| | ||| | | |||||| Sbjct 10249 GTAGAATTCAATTCTGAGTTTTACTTTGGTGGAAATGTCTTCAGGCCAGCTATCAAGTGG 10190 Query 3692 TCTCTAGCTAGTTTGGGTATAGTTGAGGTCGAGAGCCTTGTAGAGCGTCAAGAAGTAATG 3751 | || || | |||| | || || |||| ||| | || | || || ||| Sbjct 10189 GCCCTGGCGGCTCTGGGAGTCTGCGACGTGGAGAACCTGATTGAAAGGCAGGAGACTATG 10130 Query 3752 AACAACCAAATAACTGAACTGCTTGAGGGAGGATCTGGTTTTCGCCAAGCTGCAGAGACC 3811 |||| || || | ||| |||| |||||||||||||| ||||| || || ||||| Sbjct 10129 AACAGTCAGATCATGGAAATGCTGGAGGGAGGATCTGGCTTTCGGCAGGCAAGTGAGACA 10070 Query 3812 CAGGTTGCTCA 3822 || | ||||| Sbjct 10069 CAATTGGCTCA 10059 >seq888 Length=72682 Score = 95.1 bits (104), Expect = 5e-16 Identities = 202/300 (67%), Gaps = 4/300 (1%) Strand=Plus/Minus Query 2812 GGATGGTGGACTAAGAGTGGACTTATTCAAAAAGAATCAGCACGGGGGTCTGAGAGAAAT 2871 ||| || || || | | |||| | || ||||| |||||||| ||||| | ||| | Sbjct 68690 GGACGGCGGGCTGCGTGCGGACATCTTTAAAAAACCGCAGCACGGTGGTCTACGCGAAGT 68631 Query 2872 CTATGTCATGGAGATCCATTCGCGAATAGTGCAACTCGTGGTTGAAGAGATATCGAGGGC 2931 | || | || | |||||||| || |||| || ||| | || || || || |||| Sbjct 68630 TTTCGTTCTAGAAGTGCATTCGCGGATTTTGCAGCTGGTGCTCGAGGAAATTGCGCGGGC 68571 Query 2932 ATTGTGCCAAGAGCTGGATATAGAGATGATGATGCACCCCGGCAACAAGCTGAGGAAGCC 2991 | | || || || | || || | |||||||||||| | | || |||| | ||| Sbjct 68570 AGTCTGTCAGGATATCTCCATCGAAACGATGATGCACCCGGAGAGTAAACTGACAATGCC 68511 Query 2992 GCAAGAGCACATGTACAAATCTGCAAGAAGAACTAGTCCATATAAGGTC--AACATAAGC 3049 || |||||||||| ||||||| | ||| | | | ||| | | ||||| | Sbjct 68510 ACAGACGCACATGTACGAATCTGC--GTCGAAAACGGCGAAATACCGCCGAAACATCTCC 68453 Query 3050 AGCTCCAATGATGCTAAGGTCTGGAATCAAGGCCATCATGTCGCGAAGTTCGCTCAGTTT 3109 ||||| || || || || |||||||| ||||| ||||| ||||| ||||| |||||| Sbjct 68452 AGCTCAAACGACGCGCGTGTGTGGAATCAGGGCCACCATGTGGCGAAATTCGCGCAGTTT 68393 >seq11931 Length=12406 Score = 84.2 bits (92), Expect = 9e-13 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 2031 TAGTCCACCTGGAGGACAAGCCCAGGACTGAAGAAATAATGACTCTCTTCAGGTATATCT 2090 |||| |||||||||||||||||| | || || ||||| |||||||| ||| | || |||| Sbjct 6198 TAGTGCACCTGGAGGACAAGCCCCGAACCGAGGAAATCATGACTCTATTCCGCTACATCT 6257 Query 2091 CCATGGAGAAATTCTC 2106 | ||||||||||| || Sbjct 6258 CGATGGAGAAATTTTC 6273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20429228807840