Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_031691.1 Length=11238 Score E Sequences producing significant alignments: (Bits) Value seq52009 284 9e-73 >seq52009 Length=989 Score = 284 bits (314), Expect = 9e-73 Identities = 613/911 (67%), Gaps = 12/911 (1%) Strand=Plus/Minus Query 5069 TGCCAGTTAGGACCGAAATCTAATATTTGCTTTGGAGTGGGCCATGTCTTGTCAACTATA 5128 ||||||| ||||| ||||| | ||||| || || |||||||| || ||||| | | Sbjct 971 TGCCAGTGGGGACCAAAATCCAGTATTTTTTTGGGGGTGGGCCAAGTTTTGTCCGAGACA 912 Query 5129 TGTTTTTTGAAGACATGGTCATCGTCTAGAA-GAGAGGCATCTACATACCAGGTCCGATC 5187 || || ||||| || | || ||||| | ||| || |||||||| || Sbjct 911 TGCTTCTTGAACGTGTGTTTGTCATCTAGTTTGTCAGGG-TCCACATACCATACTTTGTC 853 Query 5188 TTTATCAAATTTATCCCTGAGGACAATGTAAGCCAAATCACTTGCCAGCTCTGATGCAAA 5247 || |||||||| || | || ||||| ||||||| |||||| |||| ||| |||||| Sbjct 852 CTTGTCAAATTTGTCTTTCAGAACAATATAAGCCAGATCACTGGCCAATTCTTCTGCAAA 793 Query 5248 -GTTGAAGTCTATTATCTTCTCCATGGTTACTTGATCATAGAGGGCTCTGAGTCCTTCCA 5306 | | | ||||| ||| || || || || || | ||| |||| ||| || || | Sbjct 792 AGATCGA-TCTATCTGCTTTATCAGAGTCACCTGCTCGTGGAGCGCTCGGAGGCCCTCTA 734 Query 5307 AGCAGTCGAGGAATGGATGTCCCCAATGCCTGAAAGATCCATACATGGTTAAGACGGTCT 5366 || | || || || || ||||| || || || || ||||| ||||| | ||| || | Sbjct 733 GACAATTTAGAAAAGGGTGACCCCAGTGTCTAAAGGAACCATAGATGGTAAGGACAGTGT 674 Query 5367 CCACATGATGTTGTGTATTAATGAGTCTTATGAGCT----CTCTCATTGGAGGTAAGTTA 5422 || |||||||| ||||| |||||| || ||| |||| || | || | | | Sbjct 673 TTACGTGATGTTGAGTATTTATGAGT----TGGGCTATATCTCTGATGGTTGGAAGGGTT 618 Query 5423 GCGCTGAGTTCCTCCCCCATCCTCACTAAATGGTCTCTAAAGTTTGGATCCTGAGGAATT 5482 ||| || || ||| | ||||| ||| || ||| ||| | ||||| | ||| ||| Sbjct 617 CTGCTCAGGTCATCCACAGTCCTCCTTAAGTGATCTTGGAAGCTCGGATCTTTAGGTATT 558 Query 5483 TTAGGCCTGTATTCGTGAGCAAGTTCAGATAATCGTAAATTGCATAGGGGCTCTATTAAC 5542 || || | |||| || || || || || || | || |||||||| || || ||| | Sbjct 557 TTTGGGCGATATTGATGTGCCAGGTCGGACAACCTTAGGTTGCATAGAGGTTCAATTGTC 498 Query 5543 TTTAAAGCACTATATGAATCATTTCCCCCATGGTCTAGACATTTGTCTCCTAACGTATAC 5602 || | ||| ||| || | |||||| | || || ||| ||||||||| |||| Sbjct 497 TTGATGGCATCATACGATTGATTTCCTCTCAATTCCAGGCATCTGTCTCCTAGTTTATAG 438 Query 5603 AACTTGGACATGGTTAAACAAGAATTGGGAGGGAAATGATTGTCGACTCTATTCTGCATT 5662 | | ||| || | | || | ||||||||||| || |||||||| |||||||| Sbjct 437 AGTCTATTCATTGTCAGATGTGATTCCGGAGGGAAATGGTTATCGACTCTGTTCTGCATG 378 Query 5663 GATAATAAGGTGTGGAAGCGAGCCAAATAAGTGTCCTTCATCATTAATAGCATGTTCCTA 5722 | | | |||||| || | || | |||||||||||||||||||| ||||| |||||| Sbjct 377 GCCATGAGGGTGTGAAATCTGGCTAGGTAAGTGTCCTTCATCATTAACAGCATATTCCTA 318 Query 5723 TCTAAGATGTAACCATGATTGAGGAGATAAATCAGTCCATCAGATATTATTATTTTACCT 5782 || | || | | || | | || || | | |||||| || | | ||||| || Sbjct 317 TCCAGTATTTGATTGTGTTGAATTAGGTATACAAATCCATCTGACACCAGAATTTTCCCG 258 Query 5783 AGATTTTTTGAATTAAAGGAGGAATTATGACCAACTCCTGATTCCGAAATATTGAATTCA 5842 | ||| ||| ||| || | || || || ||| || | | || |||||||| Sbjct 257 AAGTTTCGAGAAGAAAATAAGAAGTTTTGCCCGACTGTTGTGTTTGTGATGTTGAATTCG 198 Query 5843 GTAAATTCTTGAGCTATAGCAATTCTTTCTTCCTGATTGACAGAGTTAAGAATTAATGTT 5902 || ||||| | || || | ||||||||| | ||| |||| ||||||| | || Sbjct 197 GTGAATTCATTGGCAATCTGACCTCTTTCTTCATCATTAACAGCATTAAGAAGCAGGGTG 138 Query 5903 ACTACATGTAACTCATAACTGTATTGACCCCACTTGAGTGTATCTTTATTAACGTTGGAT 5962 || ||||||||||||||||| || || |||||||| || || || | | ||||||||| Sbjct 137 ACCACATGTAACTCATAACTATACTGTCCCCACTTCAGAGTTTCGGCACTGACGTTGGAT 78 Query 5963 TTAGTGGGGTT 5973 || || || || Sbjct 77 TTGGTAGGATT 67 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35811404459112