Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_011639.1 Length=13196 Score E Sequences producing significant alignments: (Bits) Value seq64892 105 6e-19 >seq64892 Length=10189 Score = 105 bits (116), Expect = 6e-19 Identities = 173/247 (70%), Gaps = 17/247 (7%) Strand=Plus/Minus Query 8415 TAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAATGTCATGGGAACTCAG 8474 |||||| |||| || |||| ||| | ||||| | ||||||||| |||||| | || Sbjct 2203 TAAAGAGAGAGCAA-GAAATA---TGGCTGGTTCTTTTATTTAATGTCCTGGGAAATGAG 2148 Query 8475 AGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTTCCTCTATTCCA-TG 8533 |||||| ||||| || ||||| || ||| || || ||||||| || |||| | | Sbjct 2147 AGAGTACTTTGTAAAAACGGAGTATCTAATTGAGCAACATTTTGTCCCATTATTTAAATT 2088 Query 8534 GATTAACTATGGCTGATGATCTACAATCTGTTATAAAGAAGATGTTAGAAAATTCTCAAG 8593 | ||| |||||||||||||| | | |||| ||||| |||| |||||||| | Sbjct 2087 GGTTA-CTATGGCTGATGATATTGTGACCGTTACAAAGACGATGCTAGAAAATAGTAGTA 2029 Query 8594 GCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCATATTGATTATGAAAAAT 8653 |||| | ||||| | | | | || ||||||||||| ||||||||||| | Sbjct 2028 GCCA-----------ACTATGACTTTATCACGATTGCAAATCATATAGATTATGAAAAGT 1980 Query 8654 GGAATAA 8660 | ||||| Sbjct 1979 GAAATAA 1973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42049702628343