Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_017685.1 Length=14717 Score E Sequences producing significant alignments: (Bits) Value seq64892 82.4 7e-12 >seq64892 Length=10189 Score = 82.4 bits (90), Expect = 7e-12 Identities = 102/138 (74%), Gaps = 4/138 (3%) Strand=Plus/Minus Query 9858 TAAAGAAAGAGAATTAAAAATTGATGGCAGATTCTTCTCATTAATGTCATATGATATGAG 9917 |||||| |||| | | |||| ||||| | ||||| | |||||||| | || ||||| Sbjct 2203 TAAAGAGAGAGCA--AGAAAT--ATGGCTGGTTCTTTTATTTAATGTCCTGGGAAATGAG 2148 Query 9918 AGATTATTTTGTTATAACGGAGTATCTGATaaaaaaaTACTATGTTCCATTATTCAAAGG 9977 ||| || ||||| | |||||||||||| || | || | | ||| |||||||| ||| Sbjct 2147 AGAGTACTTTGTAAAAACGGAGTATCTAATTGAGCAACATTTTGTCCCATTATTTAAATT 2088 Query 9978 ATTAACAATGGCTGATGA 9995 | || ||||||||||| Sbjct 2087 GGTTACTATGGCTGATGA 2070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46910071782360