Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_031282.1 Length=12651 Score E Sequences producing significant alignments: (Bits) Value seq64892 125 6e-25 >seq64892 Length=10189 Score = 125 bits (138), Expect = 6e-25 Identities = 211/300 (70%), Gaps = 23/300 (8%) Strand=Plus/Minus Query 7713 TGATAAGTACGGATTAGATCTGGAATATTTAATCATTG-GATTAA--AGGAG-AAAGAGC 7768 ||||| ||| || |||||| | | || ||||| | |||| ||||| |||||| Sbjct 2255 TGATAGGTATGGCTTAGATAACAACTCTTATGCCATTGTGCTTAAGGAGGAGTAAAGAGA 2196 Query 7769 GAGAAATCAAGAAAGACGGGAGATTCTTCTCTCTTATGTCGTGGCAACTCAGGGATTACT 7828 ||| ||||||| | || | ||||| | | | ||||| ||| || | || || |||| Sbjct 2195 GAG----CAAGAAATATGGCTGGTTCTTTTATTTAATGTCCTGGGAAATGAGAGAGTACT 2140 Query 7829 TTGTAATAACCGAATATTTGATCAAGCAACACTTTGTCCCATTATTCGA--CGGTTTGAC 7886 |||||| ||| || ||| | || ||||||| |||||||||||||| | |||| || Sbjct 2139 TTGTAAAAACGGAGTATCTAATTGAGCAACATTTTGTCCCATTATTTAAATTGGTT--AC 2082 Query 7887 TATGGCAGATGATCTCACGACTGTTATCAAGAAAATGATGGACAACGCAAATGGTCAAGG 7946 |||||| |||||| | ||| |||| |||| ||| | || |||| || Sbjct 2081 TATGGCTGATGATATTGTGACCGTTACAAAGACGATGCTAGA------AAAT-----AGT 2033 Query 7947 ATTAGATACCTATGATTATATATCCATAGCCAATCATATAGATTATGAAAAGTGGAATAA 8006 | ||| | |||||| | ||| | || || ||||||||||||||||||||||| ||||| Sbjct 2032 AGTAGCCAACTATGACTTTATCACGATTGCAAATCATATAGATTATGAAAAGTGAAATAA 1973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40312876940940