Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_001560.1 Length=11161 Score E Sequences producing significant alignments: (Bits) Value seq5447 181 8e-42 seq79413 91.5 1e-14 >seq5447 Length=4366 Score = 181 bits (200), Expect = 8e-42 Identities = 621/945 (66%), Gaps = 71/945 (8%) Strand=Plus/Minus Query 6234 CAAAGGCTACCAATTGGAAAGAATTTCTTA-AAGAGATTGATGAGAAGGGCTTAGATGAT 6292 |||| | || |||||| ||||| |||| || |||| |||| | || |||||| || Sbjct 2845 CAAAAGAGACAAATTGGCCGGAATT-CTTACAAAAGATAAATGATGAAGGATTAGATAAT 2787 Query 6293 GATGATCTAATTATTGGTCTTAAAGGAAAGGAGAGGGAACTGAAGTTGGCAGGTAGATTT 6352 ||| || || ||||| || |||| || || || ||| | || | ||||||| | Sbjct 2786 GATAATTACATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATAT 2727 Query 6353 TTCTCCCTAATGTCTTGGAAATTGCGAGAATACTTTGTAATTACCGAATATTTGATAAAG 6412 || ||||||||||||||| | || ||||||| || || |||||||||| | || || Sbjct 2726 TTTTCCCTAATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAA 2667 Query 6413 ACTCATTTCGTCCCTATGTTTAAAGGCCTGACAATGGCGGACGATCTAACTGCAGTCATT 6472 | ||| | | ||| | ||||| | |||| |||| || ||| | || || | ||| Sbjct 2666 AAATATTACTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATT 2607 Query 6473 AAAAAGATGTTAGAT---TCCTCATCCGGCCAAGGATTGA-AGTCATA-TGAGGCAATTT 6527 || |||||| | ||| || ||| |||| ||||| | | ||| | |||||| Sbjct 2606 AAGAAGATGATGGATATATCGAGATC---CCAA--ATTGACACTGATACAAAATCAATTT 2552 Query 6528 GCATAGCCAATCACAT-TGATTACGAAAAATGGAATAACCACCAAAG----GAAGTTATC 6582 | || ||||| ||| | |||||| ||||||||| ||||| ||||| |||| | Sbjct 2551 GTATTGCCAACCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAG----C 2496 Query 6583 AAACGGCCCAGTGTTCCGAGTTATGGGCCAGTTCTTAGGTTATCCATCCTTAATCGAGAG 6642 ||| |||||| || ||| ||||| | || |||| ||||| |||| | | Sbjct 2495 CAACAACCCAGTATTTGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCG 2436 Query 6643 AACTCATGAATTTTTTGAGAAAAGTCTT--ATATACTACAATGGAAGACCAG----ACTT 6696 || ||||| ||||| ||||||||| || |||||| | ||||||| |||| Sbjct 2435 CACGCATGAGATTTTT--CAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTT 2378 Query 6697 GATGCGTGTTCACAACAACACACTGATCAATTCAACCTCCCAACGAG------TTTGTTG 6750 || || ||| ||| | || ||| | || ||| | | ||||||| Sbjct 2377 -AT-AGT------AACCACAGATGGAGAAATCGA--GTCACAAGGGGATTGTTTTTGTTG 2328 Query 6751 GCAAGGACAAGAGGGTGGACTGGAAGGTCTACGGCAAAAAGGATGGACTATCCTCAATCT 6810 | | || ||||| || || | ||||| || ||||||| ||||||| ||| | ||| | Sbjct 2327 GAATGGGCAAGATGGGGGTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTT 2268 Query 6811 ACTGGTTATTCAAAGAGAGGCTAAAATCAGAAACACTGCTGTCAAAGTCTTGGCACAAGG 6870 ||||||||| ||| || |||||| |||| || || ||| ||||| || || Sbjct 2267 ACTGGTTAT----AGATAGAGTAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGG 2212 Query 6871 TGATAATCAAGTTATTTGCACACAGTATAAAACGAAGAAATCGAGAAACGTTGTAGAATT 6930 |||||||||| ||||| || || || ||| || |||||| | ||| | ||| Sbjct 2211 AGATAATCAAGCCATTTGTACTCAATACAAAGTGAGGAAATCCCG---TGTT-TTTAATG 2156 Query 6931 ACAGGGTGC----TCTCAATCAAATGGTTTCTAATAATGAGAAAATTATGACTGCAATCA 6986 | | | | |||| |||| || |||||| ||| | ||| | ||||| Sbjct 2155 AGACTAAACAACATTACAATGAAATTGTACAAAATAATCAGACCGTCATGTCAGCAATAG 2096 Query 6987 AAATAGGGACAGGGAAGTTAGGACTTTTGATA---AATGACGATGAGACTATGCAATCTG 7043 ||| || |||||||| ||||||| || | ||||| ||||| |||||| Sbjct 2095 CTGCAGGAACCACAAAGTTAGG---TTTGATAATCAACAAAGATGAAACTATTCAATCT- 2040 Query 7044 CAGATT-ACTTGA--AT-TATGGAAAAATACCGATTTTCCGTGGAGTGATTAGAGGGTTA 7099 ||| |||| | || ||||| |||||||| || | |||||||| || || || Sbjct 2039 ---ATTAACTTCATCATCTATGGGAAAATACCTATAATTAAGGGAGTGATAAGGGGATTG 1983 Query 7100 GAGACCAAGAGATGGTCACGAGTGACTTGTGTCACCAATGACCAA 7144 || | ||||| ||| || || || || | || ||||||||| Sbjct 1982 GATATTAAGAGGTGGAGTCGTGTAACATGCATAACGAATGACCAA 1938 >seq79413 Length=4423 Score = 91.5 bits (100), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 6242 ACCAATTGGAAAGAATTTCTTAAAGAGATTGATGA-GAAGGGCTTAGATGATGATGATCT 6300 || |||||| ||| ||| ||||| | || |||| | || ||| ||| | ||||| || Sbjct 931 ACTAATTGGCCAGAGTTTATTAAAAAAGTTAATGATGTTGGACTT-GATCAAGATGAACT 989 Query 6301 AATTATTGGTCTTAAAGGAAAGGAGAGGGAACTGAAGTTGGCAGGTAGATTTTTCTCCCT 6360 |||||| || |||| || || || || ||| |||||| ||| |||| |||| | | Sbjct 990 AATTATAGGGCTTAGAGCTAAAGAAAGAGAATAAAAGTTGA-AGGAAGATATTTCGCATT 1048 Query 6361 AATGTCTTGGAAATTGCGAGAATACTTTGTAATTACCGAATATTTGATAAAGACTCATTT 6420 ||||| ||| || ||||||||||||| ||||| || ||| | ||||| || | Sbjct 1049 GATGTCGTGGCCTTTATGAGAATACTTTGTTATTACAGAGTATCTATTAAAGGAATATAT 1108 Query 6421 CGTCCCTATGTTTAAAGGCCTGACAATGGCGGACGA 6456 ||||| | || | || | |||||||| ||||| Sbjct 1109 TCTCCCTTTATTCAGTAGCATAACAATGGCAGACGA 1144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35561971323500