Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_002526.1 Length=14900 Score E Sequences producing significant alignments: (Bits) Value seq5447 143 3e-30 seq64995 105 6e-19 seq3346 89.7 5e-14 >seq5447 Length=4366 Score = 143 bits (158), Expect = 3e-30 Identities = 535/828 (65%), Gaps = 23/828 (3%) Strand=Plus/Minus Query 9788 TGGCATGAATTGCCCATTATTCAATGTTATGAAATACCAGACATGATTGATATAAGTCAG 9847 |||| | |||| ||| | | | |||| |||||| ||||| ||||||| ||| | Sbjct 3017 TGGCCTAAATTACCCTTGACCCCTTGTTTTGAAATTCCAGAAGTGATTGAACCCAGTTAT 2958 Query 9848 ATTTATTCTGACAAAAGTCACTCATTAGATAGATCTGAGGTCTTAA-AAATAATTAAAGA 9906 |||||| ||| |||||||| || ||| | ||| | |||| |||| | | |||| Sbjct 2957 ATTTATAGTGATAAAAGTCATTCTTTAACAAAATCACAA---TTAATAAATCACTTAAGA 2901 Query 9907 GCAAAAACACAAAAGA--ATACCTACTAAGAGAGTATTGCAAACTTTGCTTGAAAAACCA 9964 | | | | ||| ||||| || | | ||| || | || | || ||| || Sbjct 2900 TTATATCCTAATAAGCCTATACCATCTCACAAAGTCTT---ATCTATTTTTATAAATTCA 2844 Query 9965 GCA---ACAAATTGGCCAGAATTTCTCAAGGCGGTGAATGATTATGGTTTAGATTGGGAA 10021 | ||||||||||| ||||| | | | | |||||| | || |||||| || Sbjct 2843 AAAGAGACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGAT 2784 Query 10022 AAATTGGTAATTGGACTAAAGGCTAAGGAAAGAGAGCTTAAAGAAGAAGGGAGGtttttt 10081 || | |||||||||| || ||||| |||||||| | |||||||| || || | |||| Sbjct 2783 AATTACATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTT 2724 Query 10082 tCATTAATGTCTTATGAATTAAGGGATTATTTTGTCTCAACGGAGTACTTAATaaaaaaa 10141 || ||||||||| || | || || ||||| || || || ||| | || |||||| Sbjct 2723 TCCCTAATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAA 2664 Query 10142 TACTTTGTGCCATTATTTGAAGGATTGACAATGGCTGATGACCTAAATACTGTTATCaaa 10201 || | | || | ||| | | ||||| |||| ||||| | | || | || || Sbjct 2663 TATTACTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAG 2604 Query 10202 aaaaTGTTAGATGTCTCTAG-TGGTCAGGGAACAAGGGAATATGAATACATCACAATTGC 10260 || ||| | ||| | || || | | ||| | | | ||| || ||||| Sbjct 2603 AAGATGATGGATATATCGAGATCCCAAATTGACACTGATACA-AAATCAATTTGTATTGC 2545 Query 10261 CAATAATAT-TGATTATGAAAAATGGAATAACTATCAAAGAATTGAATCCAATGGGCCGG 10319 ||| | | ||||| ||||||||| ||| |||||||| ||| |||| || | Sbjct 2544 CAACCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAG 2485 Query 10320 TGTTCACTGTGATGGGACGATTTTTAGGCTTGCCTAATTTGTTTACTAGAACTCATGAGT 10379 | || || ||||| |||| |||| | || || || ||||| | || |||||| Sbjct 2484 TATTTGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGA 2425 Query 10380 TTTTCCAAAAGAGTTTGATCTATTACAACCAAAGACCAGACCTCATGATGGTGA--GAGG 10437 |||| |||||| ||| || || ||| | |||||||| | | || || | | Sbjct 2424 TTTTTCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAG 2365 Query 10438 ACGGGAATGTCTGAACAGATTGGGAGTGAAAGTGTGTTGGGAAGGACAAAAGGGAGGATT 10497 | || | || || | |||| || | |||||| | || ||| | || || || Sbjct 2364 ATGGAGAAATCGAGTCACAAGGGGATTG--TTTTTGTTGGAATGGGCAAGATGGGGGTTT 2307 Query 10498 AGAAGGTTTGAGACAAAAGGGATGGAGCATATTAAATTATTTGATGATAGAGAGAGAAAG 10557 |||||| |||| |||||||||||||| ||| | |||| || | ||||| || || Sbjct 2306 AGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAG----AG 2251 Query 10558 TAGAGTAAGAAACACAAGAGTTAAAATTCTTGCTCAAGGAGACAATCA 10605 || | | |||| |||| |||| | | | ||||| ||||| ||||| Sbjct 2250 TAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCA 2203 >seq64995 Length=2604 Score = 105 bits (116), Expect = 6e-19 Identities = 392/606 (65%), Gaps = 34/606 (6%) Strand=Plus/Plus Query 9624 TATTGGCTAGTGATTTAGCATTCAAAATACT-AAGGAAAAATTTCTTAGAGAAGAAGTGC 9682 |||| ||||| |||| || | |||||| | ||||| ||||| | | |||| ||| Sbjct 765 TATTAGCTAGCAATTTTGCTTATAAAATATTGAAGGATAAATTCTTCAAAGAA-AAGAAA 823 Query 9683 TGGTCTGTAGACAA----AAATAAAATGGACAAAAAGCATAAGTTATATCATCACATCAG 9738 |||| ||||||||| |||| | || | | | ||| ||| || | ||| Sbjct 824 TGGTTTGTAGACAATTGAAAATTACCTGAAGACCACCCAT---TTAAATTTTTT-ATCGA 879 Query 9739 TCATAATACTTGGCCCACGCAACAGATTATAGATGAGTTTGGAGATCACTGGCATGAATT 9798 | | || | ||||||| | ||||| | ||| ||||| ||| || |||||| | || Sbjct 880 TTACAACATTTGGCCCTCCCAACAAGTCATAAATGAGCATGGTTATATATGGCATAAGTT 939 Query 9799 GCCCATTATTCAATGTTATGAAATACCAGACATGATTGATATAAGTCAGATTTATTCTGA 9858 ||| || || |||| | ||| || ||||| ||| ||||| | | | || ||| ||| Sbjct 940 GCCAATAATCAAATGCTTTGATATTCCAGATATGTTTGATCCTACTAATATATATAATGA 999 Query 9859 CAAAAGTCACTCA-----TTAGATAGATCTGAGGTCTTAAAAATAATTAAAGAGCAAAAA 9913 || ||||||| ||| | ||| ||| | ||| ||| || || || Sbjct 1000 TAAGAGTCACTTTATGACTTATACAGAACTGGTG----AAACATATACAATGA-----AA 1050 Query 9914 CACAAAAGAATACCTACTAAGA----GAGTATTGCAAACTTTGCTTGAAA--AACCAGCA 9967 |||| || |||||| | ||||||| || | ||| ||| || | || Sbjct 1051 TCCAAATAAACCTATACTAACATGTAGAGTATT--AATTTCAACTTTAAATAAAACTGCT 1108 Query 9968 ACAAATTGGCCAGAATTTCTCAAGGCGGTGAATGATTATGGTTTAGATTGGGAAAAATTG 10027 || | ||||| ||||| | || || |||||||| || || | || | || Sbjct 1109 ACCGACTGGCCCAAATTTTTAAAAAGAGTAAATGATTAGGGATTGAGTAAAGATGAGTTA 1168 Query 10028 GTAATTGGACTAAAGGCTAAGGAAAGAGAGCTTAAAGAAGAAGGGAGGtttttttCATTA 10087 |||| || | | ||||| || ||||| ||||| |||| | || || ||| ||| Sbjct 1169 ATAATAGGGTTGAGAGCTAAAGA--GAGAGGTTAAAAGAGAACGTAGATTCTTTGTATTG 1226 Query 10088 ATGTCTTATGAATTAAGGGATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTT 10147 ||||||| ||||| |||||||||||| ||| |||||| | |||| || || | Sbjct 1227 ATGTCTTGGACTTTAAGAGATTATTTTGTCATAACAGAGTACCTTTTAAAGGAACACATA 1286 Query 10148 GTGCCATTATTTGAAGGATTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTG 10207 | ||||||||| || | | || ||||||||||| || ||| | | ||| |||||| Sbjct 1287 CTTCCATTATTTAAAAGTATAACTATGGCTGATGATATAGTTACCTTAACCAAGAAAATG 1346 Query 10208 TTAGAT 10213 ||||| Sbjct 1347 CTAGAT 1352 >seq3346 Length=1548 Score = 89.7 bits (98), Expect = 5e-14 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 10472 TGTTGGGAAGGACAAAAGGGAGGATTAGAAGGTTTGAGACAAAAGGGATGGAGCATATTA 10531 || ||||| || ||| | || ||| | ||||| || ||||||||||| ||||| || | Sbjct 830 TGCTGGGATGGTCAAGATGGGGGACTTGAAGGATTAAGACAAAAGGGGTGGAGTATTGTT 771 Query 10532 AATTATTTGATGATAGAGAGAGAAAGTAGAGTAAGAAACACAAGAGTTAAAATTCTTGCT 10591 |||| |||| ||||| |||||||| | | || ||||||||| | || | | ||| Sbjct 770 AATTTACTGATAATAGATAGAGAAAGCAAATTACGAAACACAAAAATTGGGGTATTAGCT 711 Query 10592 CAAGGAGACAATCA 10605 ||||||||||| || Sbjct 710 CAAGGAGACAACCA 697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47509382401757