Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_002803.1 Length=11019 Score E Sequences producing significant alignments: (Bits) Value seq5447 93.3 3e-15 >seq5447 Length=4366 Score = 93.3 bits (102), Expect = 3e-15 Identities = 259/390 (66%), Gaps = 7/390 (2%) Strand=Plus/Minus Query 6162 ACAGATTGGCCAACATTCCTTAAAGCAG-TAGATGAAGAGGGATTACCCAGAGATAATCT 6220 ||| ||||||| |||| ||| | || || |||| || |||||| | |||||| Sbjct 2837 ACAAATTGGCCGGAATTC-TTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTA 2779 Query 6221 CATCATTGGATTGAAAGGGAAAGAAAGAGAGCTTAAGATTGCGGGGAGATTCTTCTCTCT 6280 ||| |||||| | |||| ||||||||||| | || | ||| |||| || || || Sbjct 2778 CATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCT 2719 Query 6281 GATGTCATGGCAATTGAGGGAGTACTTTGTAATTACAGAGTATCTGATCAAGACACATTA 6340 ||||| ||| | |||| || || || || |||| || || || || || | | |||| Sbjct 2718 AATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTA 2659 Query 6341 TGTTCCGCTCTTCAAGGGATTAACGATGGCCGACGATCTAACCTCTGTGGTAAAGAAGAT 6400 | || || || || | || || |||| || ||| | || | || | |||||||| Sbjct 2658 CTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGAT 2599 Query 6401 GTTAGATAACACTAATGGGCAAGGCTTG-GACGACTAC-TCATCTATATGCATTGCGAAC 6458 | | |||| | | ||| ||| || ||| ||| || || ||||| ||| Sbjct 2598 GATGGATATATCGAGATCCCAA--ATTGACACTGATACAAAATCAATTTGTATTGCCAAC 2541 Query 6459 CACAT-TGATTATGAAAAATGGAACAATCATCAACGGAAAGAATCCAATGGGCCTGTATT 6517 ||| | ||||| |||||||||||| |||||| | ||| |||| || ||||| Sbjct 2540 CACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATT 2481 Query 6518 TCGAGTCATGGGTCAATTCTTAGGATACCC 6547 | ||| ||||| |||| |||| || || Sbjct 2480 TGAAGTAATGGGGAAATTTGTAGGGTATCC 2451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35108056723236