Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_007020.1 Length=11440 Score E Sequences producing significant alignments: (Bits) Value seq5447 143 2e-30 >seq5447 Length=4366 Score = 143 bits (158), Expect = 2e-30 Identities = 336/498 (67%), Gaps = 17/498 (3%) Strand=Plus/Minus Query 6601 AAAGAGAGAGAACTGAAGAGAGCTGGTAGGTTTTTTGCCCTGATGAGTTGGGAGCTCAGA 6660 ||||| |||||| | || || ||||| | |||| |||| ||| ||||||| | ||| Sbjct 2759 AAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATGTCTTGGGAGATGAGA 2700 Query 6661 GAGTACTTCGTTTTTACTGAGTATCTGATTAAGGAACATTTCATTCCTCTTTTTAAGGGG 6720 || || ||||| |||| || || || ||||| || ||| | | ||||||||||| | Sbjct 2699 GAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTTAATAGT 2640 Query 6721 TTGACGATGGCCGATGATATGACCGGAGTCATCAAGAAACTGCTAGAGTGCTCCAACGGC 6780 ||||| |||| |||||| |||| | | || ||||| || | || || | | Sbjct 2639 TTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATGGATATATCGAGATCC 2580 Query 6781 CACGGAGAAACAGATTACTCAAAT--ATAACCATATCAAATCA-CTTAGATTACTCGAAA 6837 || || || || ||| |||| || || | || || || |||||||| ||| Sbjct 2579 CAAATTGACACTGA-TAC-AAAATCAATTTGTATTGCCAACCACCTCGGATTACTCAAAA 2522 Query 6838 TGGAACAATCATCAAAGATATGAATCCAACAAATATGTATTCCAAGTGATGGGATCCTTT 6897 |||||||| ||||||||| ||| ||||||| ||||| |||| ||||| ||| Sbjct 2521 TGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTAATGGGGAAATTT 2462 Query 6898 TTAGGATATCCAAATCTTATCT-CTCGCACCCACGAATTTTTCCAAAAATCCTTGATATA 6956 |||| ||||| || ||||| | | ||||| || || |||| ||||| || || || || Sbjct 2461 GTAGGGTATCCCAA-CTTATTTACCCGCACGCATGAGATTTTTCAAAAGTCTTTAATTTA 2403 Query 6957 TTTCATAAATAGGCCAGATTTAATGGTCGTAAAAGGGAACACATTGGAGCCTAAGGGTCA 7016 | | | |||| |||||| | | | |||| ||| | ||||| | |||| Sbjct 2402 CTACTGAGATAGACCAGATCAACTTATAGTAA----CCACAGA-TGGAGAAATCGAGTCA 2348 Query 7017 GATGAGG-----GTATGCTGGAACGGGCAAGCCGGGGGCCTCGAAGGTCTTCGTCAAAAA 7071 | | || | || ||||| ||||||| ||||| | ||||| || | ||||| Sbjct 2347 CAAGGGGATTGTTTTTGTTGGAATGGGCAAGATGGGGGTTTAGAAGGGCTGAGGCAAAAG 2288 Query 7072 GGGTGGAGTATTGTAAAT 7089 || |||||||| || ||| Sbjct 2287 GGATGGAGTATAGTTAAT 2270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36453817615568