Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_011639.1 Length=13196 Score E Sequences producing significant alignments: (Bits) Value seq5447 132 4e-27 seq64995 102 7e-18 seq64996 82.4 6e-12 >seq5447 Length=4366 Score = 132 bits (146), Expect = 4e-27 Identities = 424/647 (66%), Gaps = 23/647 (4%) Strand=Plus/Minus Query 8352 ATTCTTGCAAAAGATAAATGACTTTGGATTAGATTTGAAGTCTCTCATCATTGGACTAAA 8411 |||||| |||||||||||||| ||||||||| | | ||| |||||||| || Sbjct 2823 ATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTACATAATTGGACTCAA 2764 Query 8412 AGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAATGTCATGGGAACT 8471 |||||||||||||||| | ||| || |||| || || ||||||| ||||| | Sbjct 2763 AGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATGTCTTGGGAGAT 2704 Query 8472 CAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTTCCTCTATTCCA 8531 ||||| ||||| || |||| || ||||| ||||| |||||| | ||||| || | Sbjct 2703 GAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTTAA 2644 Query 8532 TGGATTAACTATGGCTGATGATCT-ACAATCTGTTATAAAGAAGATGTTAGAAAATTCTC 8590 | | || || |||| |||||| | |||| | | || ||||||||| | || | || Sbjct 2643 TAGTTTGACCGTGGCAGATGATTTGACAA-CATTGATTAAGAAGATGATGGATATATCGA 2585 Query 8591 AAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCATAT-TGATTATGAA 8649 | |||| | |||| | | ||| || || || || | ||||| | Sbjct 2584 GATCCCAAATTGACACTGATACAAAATCAATTTGTATTGCCAACCACCTCGGATTACTCA 2525 Query 8650 AAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAAGTAATGGGCCAG 8709 |||||||| || || ||||| ||| | || | || || |||||||||| | Sbjct 2524 AAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTAATGGGGAAA 2465 Query 8710 TGTTTCGGTCTTCCAAACTTATTTACACGAACACATGAATTCTTTGAACAAAGTTTGATT 8769 | | | || ||| ||||||||||| || || ||||| | ||| || | ||| ||| Sbjct 2464 TTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTTTCAAAAGTCTTTAATT 2405 Query 8770 TATTATCCTCAAAGAGCTGATTTGATGCACGTTGAAG--GCGATACACTAACAAA-CTCG 8826 || || | ||| | ||| || || || | | | | | ||| | | Sbjct 2404 TACTACTGAGATAGACCAGAT------CAACTTATAGTAACCACAGATGGAGAAATCGAG 2351 Query 8827 TCCGCA--TCACTG-GTGTGTTGGAATGGACAAAAAGGGGGTTTAGAAGGATTAAGACAA 8883 || | | || | ||||||||||| ||| | |||||||||||||| | || ||| Sbjct 2350 TCACAAGGGGATTGTTTTTGTTGGAATGGGCAAGATGGGGGTTTAGAAGGGCTGAGGCAA 2291 Query 8884 AAAGGATGGTCAGTAT--TAAATTATTTAGTTATAGAAAGGGAATCTAGGATAAGAAACA 8941 || |||||| ||||| | |||| | |||||||| || | || || |||| | Sbjct 2290 AAGGGATGG--AGTATAGTTAATTTACTGGTTATAGATAGAG----TAAAATTCGAAATA 2237 Query 8942 CAAAGGTTAAAGTATTAGCACAAGGGGATAATCAAACAATCAGTACT 8988 |||| ||| ||| || || || || ||||||||| | || ||||| Sbjct 2236 CAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTACT 2190 >seq64995 Length=2604 Score = 102 bits (112), Expect = 7e-18 Identities = 412/634 (65%), Gaps = 30/634 (5%) Strand=Plus/Plus Query 8278 AATCCAGGTAAAGTTATACCAACAAGAAGAGTGTTACAAACAATGTTGAATAAACCTGCA 8337 |||||| |||| ||||| |||| | ||||| ||| ||| || |||||| |||| Sbjct 1049 AATCCAAATAAACCTATACTAACATGTAGAGTATTAATTTCAACTTTAAATAAAACTGCT 1108 Query 8338 ACTGATTGGAAATCATTCTTGCAAAAGA-TAAATGACTTTGGATT-AGATTTGAAGTCTC 8395 || || ||| ||| || |||||| ||||||| | ||||| || || | | Sbjct 1109 ACCGACTGGCCCAAATTTTTA-AAAAGAGTAAATGATTAGGGATTGAGTAAAGATGAGT- 1166 Query 8396 TCATCATTGGACTAAAAGCTAAAGAAAGAG---AAATGA-AACGGATTGGAAGATTCTTC 8451 | || || || | | ||||||||| |||| ||| || |||| | ||||||| Sbjct 1167 TAATAATAGGGTTGAGAGCTAAAGAGAGAGGTTAAAAGAGAACGTA------GATTCTTT 1220 Query 8452 TCTTTAATGTCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAA 8511 || ||||| ||| | ||||| |||||||| | || ||||||||| | |||||| Sbjct 1221 GTATTGATGTCTTGGACTTTAAGAGATTATTTTGTCATAACAGAGTACCTTTTAAAGGAA 1280 Query 8512 TATTTTGTTCCTCTATTCCATGGATTAACTATGGCTGATGATCTACAATCTGTTATAAAG 8571 | | |||| |||| | | ||||||||||||||||| || | | | ||| Sbjct 1281 CACATACTTCCATTATTTAAAAGTATAACTATGGCTGATGATATAGTTACCTTAACCAAG 1340 Query 8572 AAGATGTTAGAAAATTCTCAAGGCCAAGGATCTAATGAT--TATGAGTATGTTTCAATAG 8629 || ||| |||| || || | ||| ||| | | | || | || | | || | Sbjct 1341 AAAATGCTAGATAAATCGAAGCAACAATCATCAACAGCTGGTAAAACGATATGT--ATTG 1398 Query 8630 CAAATCATATTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATG 8689 | |||||| ||||||| || |||||||| || |||| | ||| ||||||| | Sbjct 1399 CGAATCATGCTGATTATAGCAAGTGGAATAACCATCAAAAATATGAAAGTAATTATTGGG 1458 Query 8690 TTTTCAAAGTAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACACGAACACATGAAT 8749 | || |||||| || |||||| | |||||||||| ||||||||| Sbjct 1459 TATTTAAAGTATCAGGTTTAGCATTCGGTTATGAGAACTTATTTAATAGAACACATG--- 1515 Query 8750 TCTTTGAACAAAGTTTGATTTATTATCCTCAAAGAGCTGATTTGATGCACGTTG---AAG 8806 ||| || ||||||| | || ||| | ||| | ||||| | | |||| ||| Sbjct 1516 -TTTTCAAGAAAGTTTCTTCTACTATAAAGATAGACCAGATTTATTAAAAGTTGTTAAAG 1574 Query 8807 GCGATACACTAACAAACTCGTCCGCATCACTGGTG-TGTTGGAATGGACAAAAAGGGGGT 8865 | | | | | | ||| ||| || | | | |||||| |||||||||| || ||| Sbjct 1575 GAAAAATAGTTTCCAAC-AGTCATAAT-ATTAAAGCTGTTGGGATGGACAAAATGGAGGT 1632 Query 8866 TTAGAAGGATTAAGACAAAAAGGATGGTCAGTAT 8899 | || ||||| ||||||| ||| ||| ||||| Sbjct 1633 TGTGAGGGATTGAGACAAACAGGTTGG--AGTAT 1664 >seq64996 Length=3322 Score = 82.4 bits (90), Expect = 6e-12 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 10290 ACCATATCTCGGATCTAAAACATCTGAATCAACTTCTATAATCCAACCCTGGGAGAAAGA 10349 ||||||||| |||||||||||||||||| || | || | ||| ||||| ||||| Sbjct 446 ACCATATCTAGGATCTAAAACATCTGAAAGTACAAGTCTAGTTAGACCTTGGGAAAAAGA 505 Query 10350 GACAAATATCCCTCTTATTAGAAGGGCATCAAAATTAAGGAATGCAATATCATGGTTCAT 10409 ||||| |||||| |||| | ||| ||| | | | || || ||||||| |||||| | Sbjct 506 AACAAAGATCCCTGTTATCAAAAGAGCACTTAGAATGAGAAACGCAATATGTTGGTTCGT 565 Query 10410 TAA 10412 ||| Sbjct 566 TAA 568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42062568998501