Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_013955.1 Length=15764 Score E Sequences producing significant alignments: (Bits) Value seq5447 118 1e-22 >seq5447 Length=4366 Score = 118 bits (130), Expect = 1e-22 Identities = 621/979 (63%), Gaps = 37/979 (4%) Strand=Plus/Minus Query 10871 ATCCAAACAAACCTATTCC----CACAAGAAGAGTATTATCCACTCTGCTTAATAGAGAA 10926 |||| || || ||||| || ||||| ||| ||||| | | | | ||| | || Sbjct 2896 ATCCTAATAAGCCTATACCATCTCACAA----AGTCTTATCTATTTTTATAAATTCAAAA 2841 Query 10927 GCAACAAACTGGGCTGAATTCCTCCAAAGAATAAATGACGAAGGTTTGCCCAGGGATTGT 10986 | ||||| ||| | |||||| | |||| |||||||| ||||| || | ||| | Sbjct 2840 GAGACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAAT 2781 Query 10987 CTCGCTATTGGACTCAAAGCAAAAGAAAGAGAAGTAAAGTTAGTTGGAAGGtttttttCT 11046 | |||||||||||||| ||||||||||||||||| || || || | |||||| Sbjct 2780 TACATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCC 2721 Query 11047 TTAATGACATGGGAACTCAGAGAATATTTCGTATGTACAGAGTATATGATCAAACAGTTC 11106 ||||| | ||||| | |||||||||||||| ||| || || | || ||| | | Sbjct 2720 CTAATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATAT 2661 Query 11107 TTCATTCCCCTGTTTCAAGGCCTGACTATGGCTGATGATATG-CAAGAGGTCCTTAAAAA 11165 | | | || || ||| | | |||| |||| |||||| || ||| | | |||| || Sbjct 2660 TACTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACA-TTGATTAAGAA 2602 Query 11166 ATTACTAAGCAGTTCTAGTGGTCAAGGTTTAGACAATTAC-AACTTGATCTCAATTGCCA 11224 | | | || || ||| || | || ||| || | || | ||||||| Sbjct 2601 GATGATGGATATATCGAGATCCCAA-ATTGACACTGATACAAAATCAATTTGTATTGCCA 2543 Query 11225 ATCA-TTTTGATTATGAAAAATGGAATAATCATCAAAGATATGCTTCAAATTGCCATGTG 11283 | || | ||||| ||||||||| || ||||||||| | | || || || Sbjct 2542 ACCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTA 2483 Query 11284 TTTAAAGTCATGGGACAATGTTTTGGTTTACCCAATCTGTTCCTGCGTACACATGAATTC 11343 ||| |||| ||||| ||| | | || | ||||| | || || || ||||| | Sbjct 2482 TTTGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATT 2423 Query 11344 TTTGAGAAAAGCTTGATCTATTATGCCAATAGACCAGATTTGATGATGGTTCAAGGAGAT 11403 ||| | || || || || || ||||||||||| | || || |||| Sbjct 2422 TTTCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGAT 2363 Query 11404 TCTCTCATTAATAGA---AC-AGAGCATATGGTATGCTGGGAAGGTCAAAAAGGAGGATT 11459 | ||| || || || | || | || ||| | || ||| | || || || Sbjct 2362 ----GGAGAAATCGAGTCACAAGGGGATTGTTTTTGTTGGAATGGGCAAGATGGGGGTTT 2307 Query 11460 AGAAGGCCTTAGACAAAAGGGATGGTCCGGACTTAATTTATTGGTGATTGAGCGTGAAGC 11519 |||||| || || |||||||||||| | |||||||| |||| || || | | Sbjct 2306 AGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAGAG---- 2251 Query 11520 AAAAATCCGGAACACAAAGCTCAAAATTTTGGCACAAGGAGACAATCAAGTTATTAGTTC 11579 ||||| || || ||||| | | | ||||| || ||||| ||||||| ||| || | Sbjct 2250 TAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTAC 2191 Query 11580 TTTTTACTCTATAA--ACTTTACTTACAATGAAGATGAGCTTATTCGAGAGTTAAATAAA 11637 | ||| | | | | | | | | ||||| || | | | | ||| || Sbjct 2190 TCAATACAAAGTGAGGAAATCCCGTGTTTTTA--ATGAGACTAAACAACATTACAATGAA 2133 Query 11638 ATTGTCCAGAATAATAGGATCATTATGAATGCCATCAGGGAAGGTGCAAACAAGTTAGGT 11697 ||||| || |||||| || | | ||| || || | ||| | | ||||||||| Sbjct 2132 ATTGTACAAAATAATCAGACCGTCATGTCAGCAATAGCTGCAGGAACCACAAAGTTAGGT 2073 Query 11698 TTAATAATCAACGAGGATGAAACAATGGTGTCAGCCGAT----TTCTTGAGTTATGGGAA 11753 || ||||||||| | |||||||| || ||| | || ||| | | |||||||| Sbjct 2072 TTGATAATCAACAAAGATGAAACTAT----TCAATCTATTAACTTCATCATCTATGGGAA 2017 Query 11754 GACGCCTATTTTTAGAGGAGTCATCAAGGGATTGGACCCAAAGAGATGGTCCAGAGTCAA 11813 | ||||| ||| ||||| || | ||||||||| ||||| ||| | || | Sbjct 2016 AATACCTATAATTAAGGGAGTGATAAGGGGATTGGATATTAAGAGGTGGAGTCGTGTAAC 1957 Query 11814 CTGTACAACGAATGACCAA 11832 || | ||||||||||||| Sbjct 1956 ATGCATAACGAATGACCAA 1938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50271146944253