Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_020803.1 Length=11487 Score E Sequences producing significant alignments: (Bits) Value seq5447 113 3e-21 seq3346 109 4e-20 seq7507 82.4 6e-12 >seq5447 Length=4366 Score = 113 bits (124), Expect = 3e-21 Identities = 437/677 (65%), Gaps = 25/677 (4%) Strand=Plus/Minus Query 6576 AGCGACCAATTGGCCAGAATTTTTGTCAAGGATTGAGGAAGATGGACTACCCAAAGAGTC 6635 || ||| |||||||| ||||| || || ||| | || || ||| || || || Sbjct 2841 AGAGACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAA 2782 Query 6636 TCTGATCATAGGCTTAAAAGGGAAAGAACGTGAATTAAAAAAGGCAGGACGGTTCTTCTC 6695 | || || || | |||| |||||| | ||| ||||| | | || | | || || Sbjct 2781 TTACATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTC 2722 Query 6696 TCTGATGTCATGGGAATTGAGAGAATATTTTGTAATAACAGAATACTTAATCAAGACACA 6755 || ||||| ||||| ||||||||||||| || | || |||||| | || || | | | Sbjct 2721 CCTAATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATA 2662 Query 6756 CTATGTGCCCTTATTCAAAGGGTTAACCATGGCAGATGATATGACGGAAGTTGTAAAGAA 6815 || | || | || || | || ||| ||||||||||| |||| | | | ||||| Sbjct 2661 TTACTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAA 2602 Query 6816 AATGCTAGAAAGGAGTCAAGGGCAGGGA--GAAGATGACTACGAGCACA-TCAGCATTGC 6872 ||| | || | || || | | || ||| ||| | || | | ||||| Sbjct 2601 GATGATGGATATA--TCGAGATCCCAAATTGACACTGA-TACAAAATCAATTTGTATTGC 2545 Query 6873 CAACCACATTG-ACTATGAGAAGTGGAATAATCATCAGAGAAAGGAATCAAATGGGCCTG 6931 ||||||| | | | || || ||||| || ||||| ||| ||| | || || | Sbjct 2544 CAACCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAG 2485 Query 6932 TGTTCAGAGTCATGGGACAATTCCTAGGATATCCCAGTTTGATCGAAAAAACTCATGACT 6991 | || ||| ||||| |||| |||| ||||||| || | || ||||| Sbjct 2484 TATTTGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGA 2425 Query 6992 TTTTTCAAGACAGCTTGATTTATTACAATGGGAGACCAGACCTGATGGAAGTGAGGGGGA 7051 |||||||| | || ||||| ||| | |||||||| | | ||| | Sbjct 2424 TTTTTCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGT-------A 2372 Query 7052 ATGAATTATTGAACAAAACAG--ACAAGC---TTGTCT--GTTGGGATGGTCAGGCTGGA 7104 | | || || || || ||||| |||| | ||||| |||| || | ||| Sbjct 2371 ACCACAGATGGAGAAATCGAGTCACAAGGGGATTGTTTTTGTTGGAATGGGCAAGATGGG 2312 Query 7105 GGACTGGAAGGACTGAGACAAAAGGGATGGAGCATATTGAATCTACTTGTGATTCAGAGA 7164 || | ||||| ||||| |||||||||||||| ||| | ||| |||| || || ||| | Sbjct 2311 GGTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTAT--AGATA 2254 Query 7165 GAGTCCAAAATCAGAAACACCAAAGTGCAAACATTGGCTCAGGGAGACAATCAAGTTGTT 7224 |||| ||||| |||| || ||||| | |||||||||||||| ||||||| || Sbjct 2253 GAGT--AAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATT 2196 Query 7225 TGCACCCAATACAGAGT 7241 || || ||||||| ||| Sbjct 2195 TGTACTCAATACAAAGT 2179 >seq3346 Length=1548 Score = 109 bits (120), Expect = 4e-20 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 7072 GACAAGCTTGTCTGTTGGGATGGTCAGGCTGGAGGACTGGAAGGACTGAGACAAAAGGGA 7131 ||||| || | || ||||||||||| | ||| ||||| |||||| | ||||||||||| Sbjct 842 GACAACCTATTTTGCTGGGATGGTCAAGATGGGGGACTTGAAGGATTAAGACAAAAGGGG 783 Query 7132 TGGAGCATATTGAATCTACTTGTGATTCAGAGAGAGTCCAAAATCAGAAACACCAAAGTG 7191 ||||| || | ||| |||| | || | ||||| |||| | ||||||| ||| | Sbjct 782 TGGAGTATTGTTAATTTACTGATAATAGATAGAGAAAGCAAATTACGAAACACAAAAATT 723 Query 7192 CAAACATTGGCTCAGGGAGACAATCAAGTTGTTTGCACCCAATACAGAGT 7241 ||| ||||| |||||||| ||||| | ||||||||||||| ||| Sbjct 722 GGGGTATTAGCTCAAGGAGACAACCAAGTCATATGCACCCAATACAAAGT 673 >seq7507 Length=4973 Score = 82.4 bits (90), Expect = 6e-12 Identities = 378/589 (64%), Gaps = 28/589 (5%) Strand=Plus/Minus Query 6565 TTAAAGAAGCCAGCGACCAATTGGCCAGAATTTTTGTCAAGGATTGAGGAAGATGGACTA 6624 ||||| ||| | |||| || |||||||| ||| || |||| | ||||| || || Sbjct 2836 TTAAACAAGAAATCGACTAACTGGCCAGATTTTCTGAAGCGGATAAATGAAGAAAGATTA 2777 Query 6625 CCCAAAGAGTCTCTGATCATAGGCTTAAAAGGGAAAGAACGTGAATTAAAAAAGGCAGGA 6684 ||| | || || || ||||| |||| | |||||| | || || || | ||| Sbjct 2776 AGCAAGAATTCCCTAATTATAGGGTTAAGGGCAAAAGAAAGAGAGTTCAAGCGTGAAGGT 2717 Query 6685 CGGTTCTTCTCTCTGATGTCATGGGAATTGAGAGAATATTTTGTAATAACAGAATACTTA 6744 |||| || | | |||| ||| || || || |||||||| ||||||||||||||| Sbjct 2716 AGGTTTTTTGCATTAATGTTTTGGTGTTTAAGGGAGTATTTTGTGATAACAGAATACTTA 2657 Query 6745 ATCAAGACACACTATGTGCCCTTATTCAAAGGGTTAACCATGGCAGATGATATGACGGAA 6804 | || ||| | | | || || | || |||| ||||||||||| || | | Sbjct 2656 TTAAAAGAACATATTCTCCTTTTTTTTGATGGCATAACTATGGCAGATGACATAATCGCT 2597 Query 6805 GTTGTAAAGAAAATGCTAGAAAGGAGTC--AAGGGCAGGGAGAAGATGACTACGAGCACA 6862 || |||||||||| |||| | | || || |||| | | || || | || Sbjct 2596 CTTACAAAGAAAATGTTAGATA--AATCGAAACAGCAGTTTGTAACTGCAGACAAAACCA 2539 Query 6863 TCAGCATTGCCAACCACATTGACTATGAGAAGTGGAATAATCATCAGAGAAAGGA-ATCA 6921 | | || ||||| || || ||| |||||||| |||||||| || | || | || Sbjct 2538 TATGTATCGCCAATCATGCAGATTATAGCAAGTGGAACAATCATCAAAGTTATGAGACCA 2479 Query 6922 A--ATGGGCCTGTGTTCAGAGTCATGGGACAATTCCTAGGATAT----CCCAGTTTGATC 6975 | | || ||||| || || || | | || ||| || |||| ||| Sbjct 2478 ACTACTGG---GTGTTTAGGGTATTGTGTTTGGCGTTTGGGTATGAACACCTGTTTAATC 2422 Query 6976 GAAAAAACTCATGACTTTTTTCAAGACAGCTTGATTTATTACAATGGGAGACCAGACCTG 7035 | ||||||| | || |||||| | || || | |||||||| | |||||| | || Sbjct 2421 G----AACTCATTAATTCTTTCAAAATAGTTTTTTCTATTACAAGGATAGACCAAATCTA 2366 Query 7036 ATGGAAGTGAGGGGGAATGAATTATTGAACAAAACAGACAAGCTT----GTCTGTTGGGA 7091 | |||||| | ||| |||| || |||| | | | || || |||||||| Sbjct 2365 TTAAAAGTGAAGAGGA--GAATAAT--CTCAAAGAGTAAAGGATTCAGAGTTTGTTGGGA 2310 Query 7092 TGGTCAGGCTGGAGGACTG-GAAGGACTGAGACAAAAGGGATGGAGCAT 7139 |||||| || || ||| || ||| ||||||||| || |||||||| Sbjct 2309 TGGTCAAAACGG-GGGCTGTGAGGGATTGAGACAAACTGGTTGGAGCAT 2262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36604056955092