Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_020805.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq5447 197 1e-46 seq3346 95.1 9e-16 >seq5447 Length=4366 Score = 197 bits (218), Expect = 1e-46 Identities = 606/921 (66%), Gaps = 31/921 (3%) Strand=Plus/Minus Query 6238 AGCGACAAATTGGCTTGAGTTTCTTGAAGAGATCGACAAAAATGGATTATCTGATGAGGA 6297 || ||||||||||| || || | || |||| | | | |||||| | |||| | Sbjct 2841 AGAGACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAA 2782 Query 6298 TTTGGTGATCGGATTAAAAGGAAAAGAAAGAGAACTGAAGATTGCAGGTAGATTTTTCTC 6357 || | || ||| | |||| |||||||||||| | || | ||||||| ||| || Sbjct 2781 TTACATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTC 2722 Query 6358 ATTGATGTCTTGGAAGCTTAGGGAATACTTTGTTGTCACAGAGTATTTGATCAAGACTCA 6417 | ||||||||| || | || ||||| || || || || || || | || || | | Sbjct 2721 CCTAATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATA 2662 Query 6418 CTTTGTGCCATTGTTCCATGGGCTGACCATGGCTGATGATATGACAGCAGTGATCAAAAA 6477 | | || | || || | ||||| |||| |||||| ||||| || |||| || || Sbjct 2661 TTACTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAA 2602 Query 6478 GATGCTGGAAAGCTCGTCTGGTCAAGGGCTAACAAACTACGACAGCG-TTTGTATTGCAA 6536 |||| |||| | ||| ||| || | ||| | | | |||||||||| | Sbjct 2601 GATGATGGATATATCGAGATCCCAAATTGACACTGA-TACAAAATCAATTTGTATTGCCA 2543 Query 6537 ATCATATTG-ACTATGAAAAATGGAATAATCATCAACGAAAATTGTCCAATGGACCTGTG 6595 | || | | | || ||||||||| || |||||| || |||| || || Sbjct 2542 ACCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTA 2483 Query 6596 TTTAAAGTCATGGGACAATTCTTGGGTTATCCAAATTTGATATACCGG-ACACATGAGTT 6654 ||| |||| ||||| |||| | || ||||| || || || |||| | || |||||| | Sbjct 2482 TTTGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTT-ATTTACCCGCACGCATGAGAT 2424 Query 6655 TTTTGAGAAAAGTTTAATTTACTATAATGAAAGACCGGATCTCATGAAAGT---CAGAAA 6711 |||| | || |||||||||||| || ||||| |||| | | ||| || | | Sbjct 2423 TTTTCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGA 2364 Query 6712 TGGGATCTTAGAAAAT-AG-CACACATCAGAGGGTTT--GCTGGAATGGACAGGCAGGTG 6767 ||| ||||| || |||| | || |||| | |||||||| || | || | Sbjct 2363 TGG------AGAAATCGAGTCACA-AGGGGATTGTTTTTGTTGGAATGGGCAAGATGGGG 2311 Query 6768 GTTTAGAAGGTTTGAGACAGAAAGGATGGAGTATTCTTAATTTGCTGGTCATACAGAGAG 6827 |||||||||| |||| || || ||||||||||| ||||||| ||||| ||| | |||| Sbjct 2310 GTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAGAG 2251 Query 6828 AAGCGAAAATCCGGAATACCGCAGTTAAAGTGCTAGCACAAGGCGACAATCAAGTCATAT 6887 ||||| || ||||| |||| |||| | || || || || ||||||| ||| | Sbjct 2250 ----TAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTT 2195 Query 6888 GTACACAGTACAA---GACCAAACAGTATCGAAACGATATCGAGTTGAGACAAGCCTTA- 6943 |||| || ||||| || ||| | || || ||| | |||| | ||| Sbjct 2194 GTACTCAATACAAAGTGAGGAAA---TCCCGTGTTTTTAATGAGACTAAACAA-CATTAC 2139 Query 6944 AACCAAATGGCAGCAAACAATGATGTCATCATGAAGGCCATAGAGTCAGGAACCAATAAG 7003 || |||| | | ||| ||| | | ||||| || |||| ||||||||| ||| Sbjct 2138 AATGAAATTGTACAAAATAATCAGACCGTCATGTCAGCAATAGCTGCAGGAACCACAAAG 2079 Query 7004 TTGGGTTTGTTGATCAATCAGGATGAGACGATGCAATCTGCTGATTATCTGAACTATGGG 7063 || |||||| | ||||| | ||||| || || |||||| | | | | | ||||||| Sbjct 2078 TTAGGTTTGATAATCAACAAAGATGAAACTATTCAATCTATTAACTTCATCATCTATGGG 2019 Query 7064 AAGGTACCTATCTTTAGAGGAGTAATCAGAGGGCTGGAAACAAAGCGATGGTCCCGAGTC 7123 || ||||||| ||| ||||| || || || |||| | ||| | ||| || || Sbjct 2018 AAAATACCTATAATTAAGGGAGTGATAAGGGGATTGGATATTAAGAGGTGGAGTCGTGTA 1959 Query 7124 ACTTGTGTGACAAATGACCAA 7144 || || | || ||||||||| Sbjct 1958 ACATGCATAACGAATGACCAA 1938 >seq3346 Length=1548 Score = 95.1 bits (104), Expect = 9e-16 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 6744 TTTGCTGGAATGGACAGGCAGGTGGTTTAGAAGGTTTGAGACAGAAAGGATGGAGTATTC 6803 |||||||| |||| || | || || | ||||| || ||||| || || ||||||||| Sbjct 832 TTTGCTGGGATGGTCAAGATGGGGGACTTGAAGGATTAAGACAAAAGGGGTGGAGTATTG 773 Query 6804 TTAATTTGCTGGTCATACAGAGAGAAGCGAAAATCCGGAATACCGCAGTTAAAGTGCTAG 6863 ||||||| ||| | ||| | |||||| ||| | || || || | || || ||| Sbjct 772 TTAATTTACTGATAATAGATAGAGAAAGCAAATTACGAAACACAAAAATTGGGGTATTAG 713 Query 6864 CACAAGGCGACAATCAAGTCATATGTACACAGTACAA 6900 | ||||| ||||| ||||||||||| || || ||||| Sbjct 712 CTCAAGGAGACAACCAAGTCATATGCACCCAATACAA 676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35430911474128