Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_020806.1 Length=11088 Score E Sequences producing significant alignments: (Bits) Value seq5447 158 9e-35 >seq5447 Length=4366 Score = 158 bits (174), Expect = 9e-35 Identities = 563/863 (65%), Gaps = 49/863 (6%) Strand=Plus/Minus Query 6265 ATTGGGCTAAAAGGGAAGGAAAGAGAATTGAAGATAGCCGGGAGATTTTTCTCACTAATG 6324 ||||| || |||| || ||||||||| | || || || |||| ||| || |||||| Sbjct 2774 ATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATG 2715 Query 6325 TCGTGGAAGCTGAGAGAATATTTTGTGATCACGGAATATCTAATTAAGACACACTTTGTA 6384 || ||| || ||||||||||||| ||| | || ||||| || ||||| | | | | || Sbjct 2714 TCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTA 2655 Query 6385 CCACTTTTCCACGGCTTGACAATGGCAGATGACATGACGGCTGTAATAAAGAAAATGTTG 6444 || ||||| | | ||||| |||||||||| |||| | | || ||||| ||| || Sbjct 2654 CCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATG 2595 Query 6445 GAAAGTT--------CAAGTGGACAGGGTCTAAAAGATTATTCGGCAGTATGCATTGCAA 6496 || | | ||| | |||| | || || || || | || ||||| | Sbjct 2594 GATATATCGAGATCCCAAATTGACACTG-ATACAAAAT-------CAATTTGTATTGCCA 2543 Query 6497 ACCACAT-TGACTATGAGAAATGGAACAACCATCAGAGGAAACG-GTCAAATGAACCAAT 6554 ||||| | || || ||||||||||||||||| | || || | || | ||| | Sbjct 2542 ACCACCTCGGATTACTCAAAATGGAACAACCATCA-AAGAGCCGAAGCCAACAACCCAGT 2484 Query 6555 TTTTAAAGTCATGGGTCAATTCTTGGGGTTTCCCAACCTTATAT-CGAGGACTCATGAAT 6613 ||| |||| ||||| |||| | |||| |||||| ||||| | | | || ||||| Sbjct 2483 ATTTGAAGTAATGGGGAAATTTGTAGGGTATCCCAA-CTTATTTACCCGCACGCATGAGA 2425 Query 6614 TCTTTGAGAAAAGTC--TCATCTATTATAATGGAAGGCCTGATTTGATGAAGGT--GCA- 6668 | ||| ||||||| | || || || | || || ||| | | || || Sbjct 2424 TTTTT--CAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCAC 2367 Query 6669 AGATGGAAGACTTGTGAACACAACGAAGCAATTGGTTTGTTGGGAAGGACAGGCAGGCGG 6728 ||||||| | | | | ||||| | | | | |||||||| | || || | || || Sbjct 2366 AGATGGAGAAATCGAG-TCACAAGG--GGATTGTTTTTGTTGGAATGGGCAAGATGGGGG 2310 Query 6729 ATTAGAGGGGTTAAGACAGAAGGGATGGAGCATCTTAAACTTATTGGTTATTCAAAGGGA 6788 ||||| ||| | || || ||||||||||| || | || ||| ||||||| | || | Sbjct 2309 TTTAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAGAG- 2251 Query 6789 ATCCAAGATTCGGAACACAGCAGTTAAAGTCCTTGCACAAGGTGATAATCAAGTAATATG 6848 || ||||| || ||| |||| ||| | || || || |||||||||| || || Sbjct 2250 ---TAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTG 2194 Query 6849 CACACAGTAC-AAGACAAAACAACAC-AGAAATGAAACAGAATTGCGATCTGCTCTTACT 6906 || || ||| ||| | | | | | | | || ||| | | | |||| Sbjct 2193 TACTCAATACAAAGTGAGGAAATCCCGTGTTTTTAATGAGACTAAACAAC----ATTAC- 2139 Query 6907 CAAATGAAATTG-----AATAATGATGCAGTTATGAAAGCCATTGAATCTGGAACAAACA 6961 |||||||||| |||||| | | || ||| ||| || | | ||||| | | Sbjct 2138 --AATGAAATTGTACAAAATAATCAGACCGTCATGTCAGCAATAGCTGCAGGAACCACAA 2081 Query 6962 AACTAGGTTTGTTGATCAACCAAGATGAAACAATGCAATCAGCTGACTACCTGAATTACG 7021 | |||||||| | |||||| |||||||||| || ||||| | ||| | | | || | Sbjct 2080 AGTTAGGTTTGATAATCAACAAAGATGAAACTATTCAATCTATTAACTTCATCATCTATG 2021 Query 7022 GTAAAGTTCCCATATTTAGAGGAGTGATACGAGGTTTAGAAACAAAAAGGTGGTCACGAG 7081 | ||| | || ||| ||| ||||||||| | || || || | || |||||| || | Sbjct 2020 GGAAAATACCTATAATTAAGGGAGTGATAAGGGGATTGGATATTAAGAGGTGGAGTCGTG 1961 Query 7082 TGACTTGTGTAACAAATGACCAA 7104 | || || |||| ||||||||| Sbjct 1960 TAACATGCATAACGAATGACCAA 1938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35328620859984