Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_022580.1 Length=12676 Score E Sequences producing significant alignments: (Bits) Value seq5447 158 1e-34 seq7507 122 7e-24 seq50365 80.6 2e-11 >seq5447 Length=4366 Score = 158 bits (174), Expect = 1e-34 Identities = 427/647 (66%), Gaps = 20/647 (3%) Strand=Plus/Minus Query 7653 ACAAATTGGCCCGTATTTTTGCAAAGGATAGAAGATGAGGGATTATCTAAAAATTCTTTG 7712 ||||||||||| | ||| || |||| |||| | ||||| |||||| ||| || || Sbjct 2837 ACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTAC 2778 Query 7713 GTTATTGGTTTACAAGCCAAAGAAAGGGAAATCAAGGATGAGGGTCGATTTTTCTCTTTA 7772 | ||||| | |||| |||||||| ||| | || || |||||| ||| ||| || || Sbjct 2777 ATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTA 2718 Query 7773 ATGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAATACTTAATTAAAGAGCATTTT 7832 ||||| ||||| | | |||||||| || || || |||||| | |||||| | ||| Sbjct 2717 ATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTAC 2658 Query 7833 GTTCCATTGTTCCATGGATTAACGATGGCAGATGATTTAACCACTGTGATGAAAAAGATG 7892 | || | || || | || || ||||||||||||| || || |||| || |||||| Sbjct 2657 TTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATG 2598 Query 7893 CTGGACA-ATACA-ATCGGCCAAGGTGGCAAGGACTAC-ACACAAATTTGCATAGCCAAT 7949 |||| | || | ||| |||| || || || ||| | | |||||| || ||||| Sbjct 2597 ATGGATATATCGAGATC--CCAAATTGACACTGA-TACAAAATCAATTTGTATTGCCAAC 2541 Query 7950 CA-CTTTGATTATGAGAAATGGAACAATCATCAGAGGAAGGAATCTANNNNNNNNNNNNN 8008 || || ||||| ||||||||||| ||||| || ||| | | Sbjct 2540 CACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATT 2481 Query 8009 NNNNNNNATGGGGCAGTTTCTCGGATATCCCTCCTTAATTGAGAGAACTCATGAATTCTT 8068 |||||| | ||| | || |||||| |||| || | || ||||| | || Sbjct 2480 TGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTT 2421 Query 8069 TGAAAAAAGCTGGATTTATTATAAGGACAGAGCAGATTGTTTAGAAGTGAAGGGTGAT-- 8126 | |||| | ||||| || || ||| ||||| | ||| | ||| Sbjct 2420 TCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGATGG 2361 Query 8127 AGAATTTACTCCACTGAAGGGCA---ATTCTGTTGGAATGGACAACTAGGAGGATTGGAA 8183 |||| | ||| ||||| | || ||||||||||| ||| || || || ||| Sbjct 2360 AGAAATCGAGTCAC--AAGGGGATTGTTTTTGTTGGAATGGGCAAGATGGGGGTTTAGAA 2303 Query 8184 GGTCTCCGACAAAAAGGTTGGAGTATTTTAAATTTGTTAGTCATAAATAGAGAGAGCAAG 8243 || || | ||||| || |||||||| | ||||| | || ||||| |||| || Sbjct 2302 GGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGT----TATAGATAGAGTAAA 2247 Query 8244 ATACGAAATAC-CATGGTGAAGTGTTTGGCCCAAGGAGATAATCAAG 8289 || |||||||| | | || |||| ||||| || ||||||||||||| Sbjct 2246 ATTCGAAATACAAAAGTTGGAGTG-TTGGCTCAGGGAGATAATCAAG 2201 >seq7507 Length=4973 Score = 122 bits (134), Expect = 7e-24 Identities = 231/337 (69%), Gaps = 10/337 (3%) Strand=Plus/Minus Query 7653 ACAAATTGGCCCGTATTTTTGCAAAGGATAGAAGATGAGGGATTATCTAAAAATTCTTTG 7712 || || ||||| | ||| || | ||||| | || || ||||| || ||||| | Sbjct 2821 ACTAACTGGCCAGATTTTCTGAAGCGGATAAATGAAGAAAGATTAAGCAAGAATTCCCTA 2762 Query 7713 GTTATTGGTTTACAAGCCAAAGAAAGGGAAATCAAGGATGAGGGTCGATTTTTCTCTTTA 7772 |||| || ||| || |||||||| || ||||| ||| ||| | ||||| | ||| Sbjct 2761 ATTATAGGGTTAAGGGCAAAAGAAAGAGAGTTCAAGCGTGAAGGTAGGTTTTTTGCATTA 2702 Query 7773 ATGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAATACTTAATTAAAGAGCATTTT 7832 |||| ||| ||| |||| |||||||| |||||||||||||| | ||||| ||| || Sbjct 2701 ATGTTTTGGTGTTTAAGGGAGTATTTTGTGATAACAGAATACTTATTAAAAGAACATATT 2642 Query 7833 GTTCCATTGTTCCATGGATTAACGATGGCAGATGATTTAACCACTGTGATGAAAAAGATG 7892 | | || || |||| |||| ||||||||||| ||| | || | | || || ||| Sbjct 2641 CTCCTTTTTTTTGATGGCATAACTATGGCAGATGACATAATCGCTCTTACAAAGAAAATG 2582 Query 7893 CTGGA-CAATACAATCGGCCAAGGTGGCAAGGACTACACACAA----ATTTGCATAGCCA 7947 | || ||| || | || || | | | ||| || |||| || || || |||| Sbjct 2581 TTAGATAAATCGAAACAGC--AGTTTGTA---ACTGCAGACAAAACCATATGTATCGCCA 2527 Query 7948 ATCACTTTGATTATGAGAAATGGAACAATCATCAGAG 7984 |||| |||||| || |||||||||||||| || Sbjct 2526 ATCATGCAGATTATAGCAAGTGGAACAATCATCAAAG 2490 >seq50365 Length=2724 Score = 80.6 bits (88), Expect = 2e-11 Identities = 130/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 7714 TTATTGGTTTACAAGCCAAAGAAAGGGAAATCAAGGATGAGGGTCGATTTTTCTCTTTAA 7773 |||| || ||| ||| |||||||| || |||| || || || ||||| | ||| Sbjct 1736 TTATAGGGTTAAGAGCAAAAGAAAGAGAGGTCAAAAGAGAAGGAAGAATTTTCGCCCTAA 1795 Query 7774 TGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAATACTTAATTAAAGAGCATTTTG 7833 ||||||||| ||||| |||||||| || | || || || ||| | || || ||| || Sbjct 1796 TGTCATGGGCCTTACGAGAATATTTCTTTATTACTGAGTATTTACTGAAGGAACATATTT 1855 Query 7834 TTCCATTGTTCCATGGATTAACGATGGCAGATGATTTAACCACTGTGATGAAAAAGATGC 7893 | || ||||| | | | || |||||||||||| || || ||| ||||| | Sbjct 1856 TACCCTTGTTTGAAAGTATTACCATGGCAGATGATATAGTTACACTGACTAAAAAATTAT 1915 Query 7894 TGGACAA 7900 ||||||| Sbjct 1916 TGGACAA 1922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40404792586880