Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_022581.1 Length=11806 Score E Sequences producing significant alignments: (Bits) Value seq5447 141 7e-30 >seq5447 Length=4366 Score = 141 bits (156), Expect = 7e-30 Identities = 442/673 (66%), Gaps = 35/673 (5%) Strand=Plus/Minus Query 6744 ACAAATTGGCCAGAATTCTTGTCCTCGATTGAAAAAGATGGCCTACCTAAAGACAGCTTG 6803 ||||||||||| |||||||| ||| | | || || || ||| || | | Sbjct 2837 ACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTAC 2778 Query 6804 ATTATCGGACTGAAGGGAAAAGAGAGGGAACTaaaaaaaGCTGGACGGTTCTTTTCTCTA 6863 || || ||||| || | ||||| || ||| ||||| ||| || | | ||||| ||| Sbjct 2777 ATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTA 2718 Query 6864 ATGTCCTGGGAATTGAGGGAGTATTTTGTAATAACTGAATACCTGATCAAAACTCATTAC 6923 ||||| ||||| |||| || ||||| || | || |||||||| || |||| ||||| Sbjct 2717 ATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTAC 2658 Query 6924 GTCCCTCTCTTTAAAGGATTGACCATGGCAGATGACATGACGGAGGTCGTCAAGAAGATG 6983 | ||||| ||||| | |||||| |||||||||| |||| | | ||||||||| Sbjct 2657 TTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATG 2598 Query 6984 TTAGAAAGAAGTCAAG--GACAAGGAGAGGATGAT-TACGAGCACGTCAGCATTGCCAAC 7040 | || | | || || ||| || |||| | | || | | ||||||||| Sbjct 2597 ATGGATATA--TCGAGATCCCAAATTGACACTGATACAAAATCA-ATTTGTATTGCCAAC 2541 Query 7041 CACAT-TGATTATGAAAAATGGAACAACCATCAAAGGAAAGAGTCTAACGGCCCGGTGTT 7099 ||| | ||||| ||||||||||||||||||||| || | ||| ||| || || Sbjct 2540 CACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATT 2481 Query 7100 CAGAGTCATGGGACAATTTCTGGGGTACCCTAGTTTGATAGAAAAG-ACCCATGACTTCT 7158 ||| ||||| ||||| | ||||| || | || || | | || ||||| | | Sbjct 2480 TGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTT-ATTTACCCGCACGCATGAGATTT 2422 Query 7159 TTGAGCAAAG--CTTGATCTATTATAATGGCAGACCTG----ACTTGATGCA--GACAGA 7210 || | |||| || || || || | ||||| | |||| | | ||||| Sbjct 2421 TTCA--AAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGA 2364 Query 7211 TGGAGA---CGAGTTGCAAAACCGAACGGAAGCTTTGGTGTGTTGGAATGGTCAGAAAGG 7267 |||||| ||||| ||| | | || | ||||||||||| || | || Sbjct 2363 TGGAGAAATCGAGTCACAA---------GGGGATTGTTTTTGTTGGAATGGGCAAGATGG 2313 Query 7268 AGGATTAGAAGGACTCAGGCAAAAAGGATGGAGCATCCTCAACCTGTTGGTCATCAAAAG 7327 || |||||||| || |||||||| |||||||| || | || | |||| || | || Sbjct 2312 GGGTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAG 2253 Query 7328 AGAATCTAAAATCAGAAACACTAAAGTGCAAACTTTGGCCCAGGGAGACAATCAGGTAGT 7387 || |||||| |||| || ||||| | ||||| |||||||| ||||| | | Sbjct 2252 AG----TAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCAT 2197 Query 7388 GTGTACCCAATAC 7400 ||||| |||||| Sbjct 2196 TTGTACTCAATAC 2184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37623766514840