Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_022755.1 Length=10692 Score E Sequences producing significant alignments: (Bits) Value seq5447 116 3e-22 >seq5447 Length=4366 Score = 116 bits (128), Expect = 3e-22 Identities = 422/656 (64%), Gaps = 21/656 (3%) Strand=Plus/Minus Query 5896 GAATTCTTAGAGAGCATCGACAAAGAAGGATTGGACCATGAAGACCTTATTATAGGCCTC 5955 ||||||||| | | || | | |||||||| || |||| | || || || ||| Sbjct 2825 GAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTACATAATTGGACTC 2766 Query 5956 AAAGCAAAGGAACGTGAGTTGAAAACCGTAGGTCGGTTCTTCTCTCTAATGTCTTGGAAA 6015 ||||| || ||| | || | ||| | ||| | | || || |||||||||||| | Sbjct 2765 AAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATGTCTTGGGAG 2706 Query 6016 TTAAGAGAATACTTCGTGATAACAGAGTATCTCATAAAGACTCATTTTGTTCCTTTGTTT 6075 | |||||||| |||||| | || || || ||||| || | ||| | ||| | ||| Sbjct 2705 ATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTT 2646 Query 6076 CACGGGCTCACCATGGCGGACGACCTGACAGCTGTTATGAAGAAAATGATGGAGTCATCT 6135 | | | ||| |||| || || ||||| | | || ||||| |||||||| ||| Sbjct 2645 AATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATGGATATATCG 2586 Query 6136 TCAGGACAAGGCGCCTCCGACTATGATGCCATTGCCATTGCGAACCATATTG-ACTATGA 6194 | ||| | | | || | | ||| ||||| ||||| | | | || Sbjct 2585 AGATCCCAAATTGACACTGATACAAAATCAATTTGTATTGCCAACCACCTCGGATTACTC 2526 Query 6195 AAAATGGAATAACCATCAACGGAAAGAATCCAATGGTCCTGTCTTCAGAGTCATGGGTCA 6254 ||||||||| ||||||||| | ||| |||| || || || ||| ||||| | Sbjct 2525 AAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTAATGGGGAA 2466 Query 6255 GTTCCTAGGGTATCCAAATTTAATTTACCGGACGCATGAGTTTTTTGAGAATAGCCTCAT 6314 || |||||||||| || ||| || ||| ||||||||| ||||| | || | || Sbjct 2465 ATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTTTCAAAAGTCTTTAAT 2406 Query 6315 ATATTACAATAACAGACCCGACCTGATGAGAGTGGTGAATAATACCGTGGAGAACAGTTC 6374 || ||| | ||||| || | | | ||| || | | ||||||| || Sbjct 2405 TTACTACTGAGATAGACCAGATCAACTTATAGT----AACCACAGA-TGGAGAAA---TC 2354 Query 6375 TGATCA-AAGAG-------TCTGCTGGAATGGTCAGGCAGGGGGGCTCGAAGGACTGCGG 6426 ||| ||| | | || |||||||| || | ||||| | ||||| ||| || Sbjct 2353 GAGTCACAAGGGGATTGTTTTTGTTGGAATGGGCAAGATGGGGGTTTAGAAGGGCTGAGG 2294 Query 6427 CAAAAAGGATGGAGTATATTAAATTTGCTGGTGATAGCTAGGGAATCTCAGATTAGAAAC 6486 ||||| |||||||||||| | ||||| ||||| |||| ||| | | | ||| |||| Sbjct 2293 CAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAGAG----TAAAATTCGAAAT 2238 Query 6487 ACCTCTGTCAAAACTCTGGCACAGGGGGACAATCAGGTGATTTGCACTCAATATAA 6542 || || | |||| ||||| || ||||| | ||||| |||||||| || Sbjct 2237 ACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTACTCAATACAA 2182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34062774509952