Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_024473.1 Length=11123 Score E Sequences producing significant alignments: (Bits) Value seq5447 178 9e-41 seq3346 125 5e-25 seq7507 86.0 4e-13 seq64995 82.4 5e-12 seq59951 82.4 5e-12 >seq5447 Length=4366 Score = 178 bits (196), Expect = 9e-41 Identities = 572/875 (65%), Gaps = 27/875 (3%) Strand=Plus/Minus Query 6184 GGAATGGATGATGACGATTTGATAATTGGATTAAAGGGAAAAGAAAGAGAATTGAAAATA 6243 ||| | ||| |||| ||| ||||||||| | || | |||||||||||| | ||| | Sbjct 2798 GGATTAGATAATGATAATTACATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAA 2739 Query 6244 GCTGGGAGATTCTTCTCATTGATGTCATGG-AGATTAAGGGAATATTTTGTGATCACGGA 6302 | || |||| || || | ||||| ||| |||| | | |||||||| ||| | || || Sbjct 2738 GAGGGTAGATATTTTTCCCTAATGTCTTGGGAGATGA-GAGAATATTTCGTGGTTACCGA 2680 Query 6303 GTACTTAATCAAAACATACTACGTTCCCTTGTTTAAGGGGTTAACTATGGCAGATGACCT 6362 ||| | || |||| ||| ||| | || | ||||| | || || |||||||||| | Sbjct 2679 ATACCTCATTAAAAAATATTACTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTT 2620 Query 6363 CACATCGGTGATTAAGAAGATGATGGACAGTTCATCAGGTCAAGGGCTCGATGATTATTC 6422 ||| | ||||||||||||||||||| | || | ||| | |||| Sbjct 2619 GACAACATTGATTAAGAAGATGATGGATATATCGAGATCCCAAATTGACACTGATACAAA 2560 Query 6423 ATCAGTTTGTTTGGCTAACCATATTG-ACTACGAGAAGTGGAATAACCATCAAAGAAAGG 6481 |||| ||||| | || ||||| | | | ||| || ||||| |||||||||||| | Sbjct 2559 ATCAATTTGTATTGCCAACCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCG 2500 Query 6482 AATCTAATGGTCCCATCTTCAGAGTCATGGGACAGTTTCTGGGTTATCCATCACTCATAG 6541 || | || || | || ||| ||||| | ||| | || ||||| ||| || Sbjct 2499 AAGCCAACAACCCAGTATTTGAAGTAATGGGGAAATTTGTAGGGTATCCCA-ACTTATTT 2441 Query 6542 AGA-GAACTCATGAATTTTTTGAGAAAAGCTTAATTTATTACAATGGGCGTCCTGATCTA 6600 | | || ||||| ||||| | || |||||||| ||| | | || |||| | Sbjct 2440 ACCCGCACGCATGAGATTTTTCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAA 2381 Query 6601 ATGACCGTTCGAAATGGCACATTGTGTAATTCCACTAAGCACCGGG------TTTGTTGG 6654 | | || || || || | | ||| | | | | || ||| |||||||| Sbjct 2380 CTTATAGT----AACCACAGATGGAGAAAT-CGAGTCA-CAAGGGGATTGTTTTTGTTGG 2327 Query 6655 AATGGGCAAAAAGGAGGTTTGGAAGGACTAAGACAAAAGGGATGGAGTATTGTGAATCTC 6714 ||||||||| | || ||||| ||||| || || ||||||||||||||||| || ||| | Sbjct 2326 AATGGGCAAGATGGGGGTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTA 2267 Query 6715 TTGGTTATTCAAAGGGAAGCCAAAATTCGAAACACAGCAGTGAAGGTCTTAGCACAGGGA 6774 ||||||| | || | ||||||||||| ||| ||| || || || |||||| Sbjct 2266 CTGGTTATAGATAGAG----TAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGA 2211 Query 6775 GATAATCAGGTTATATGCACTCAATACAAGACAAAGAAAACC--AGATCAGAATTGGAAT 6832 |||||||| | || || ||||||||||| | |||| || | | ||| || | Sbjct 2210 GATAATCAAGCCATTTGTACTCAATACAAAGTGAGGAAATCCCGTGTTTTTAATGAGACT 2151 Query 6833 TAAGAGCAGTCTTAC-ATCAGATGGCAGGAAACAATAATAAAATCATGGAAGAAATTAAG 6891 || | || |||| || | || | | ||| ||| | | ||||| || ||| Sbjct 2150 AAACAACA---TTACAATGAAATTGTACAAAATAATCAGACCGTCATGTCAGCAATAGCT 2094 Query 6892 AGAGGGACAGAGAAGTTGGGCCTAATCATAAATGATGATGAGACTATGCAATCAGCAGAC 6951 ||| || ||||| || | || || || | ||||| ||||| ||||| || Sbjct 2093 GCAGGAACCACAAAGTTAGGTTTGATAATCAACAAAGATGAAACTATTCAATCTATTAAC 2034 Query 6952 TATTTAAATTACGGGAAAATTCCAATTTTCCGGGGAGTCATAAGAGGACTAGAAACAAAG 7011 | | | || |||||||| || || | |||||| ||||| ||| | || | ||| Sbjct 2033 TTCATCATCTATGGGAAAATACCTATAATTAAGGGAGTGATAAGGGGATTGGATATTAAG 1974 Query 7012 AGATGGTCACGGGTAACATGTGTCACTAATGATCA 7046 || ||| || |||||||| | || ||||| || Sbjct 1973 AGGTGGAGTCGTGTAACATGCATAACGAATGACCA 1939 >seq3346 Length=1548 Score = 125 bits (138), Expect = 5e-25 Identities = 278/411 (68%), Gaps = 16/411 (4%) Strand=Plus/Minus Query 6647 TTTGTTGGAATGGGCAAAAAGGAGGTTTGGAAGGACTAAGACAAAAGGGATGGAGTATTG 6706 |||| ||| |||| ||| | || || | |||||| ||||||||||||| |||||||||| Sbjct 832 TTTGCTGGGATGGTCAAGATGGGGGACTTGAAGGATTAAGACAAAAGGGGTGGAGTATTG 773 Query 6707 TGAATCTCTTGGTTATTCAAAGGGAAGCCAAAATTCGAAACACAGCAGTGAAGGTCTTAG 6766 | ||| | || | || | || ||| |||| | ||||||||| | | ||| |||| Sbjct 772 TTAATTTACTGATAATAGATAGAGAAAGCAAATTACGAAACACAAAAATTGGGGTATTAG 713 Query 6767 CACAGGGAGATAATCAGGTTATATGCACTCAATACAAGACAAAGAAAACCA---GATCAG 6823 | || ||||| || || || |||||||| |||||||| | ||||| || ||| | Sbjct 712 CTCAAGGAGACAACCAAGTCATATGCACCCAATACAA-AGTCCGAAAATCAAGGCATCCG 654 Query 6824 AATTGGAATTAAGAGCAGTCTTA----CATCAGATGGCAGGAAACAATAATAAAATCATG 6879 ||| ||| ||| ||||| | || | || | |||||||| | ||||| Sbjct 653 AAT--GAAATAA----AGTCTCATTATGATGAAATTATAAAAAACAATAGTGCTGTCATG 600 Query 6880 GAAGAAATTA-AGAGAGGGACAGAGAAGTTGGGCCTAATCATAAATGATGATGAGACTAT 6938 | ||||| ||| ||| ||| || ||||| || || || || | || || ||||| Sbjct 599 TCGGCAATTATAGA-AGGAACATCAAAATTGGGACTCATAATTAACAAAGACGAAACTAT 541 Query 6939 GCAATCAGCAGACTATTTAAATTACGGGAAAATTCCAATTTTCCGGGGAGTCATAAGAGG 6998 ||||| | | |||| ||| |||||||| ||||| | ||| || || ||| Sbjct 540 ACAATCTATTAATTTCTTAATTTATGGGAAAATCCCAATAATAAAGGGGGTTATTAGAAA 481 Query 6999 ACTAGAAACAAAGAGATGGTCACGGGTAACATGTGTCACTAATGATCAGAT 7049 |||| | || ||||| | ||||||||| | || ||||| ||||| Sbjct 480 TTTAGATATTAAACGATGGAGTAGAGTAACATGTATAACAAATGACCAGAT 430 >seq7507 Length=4973 Score = 86.0 bits (94), Expect = 4e-13 Identities = 115/158 (73%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 6205 ATAATTGGATTAAAGGGAAAAGAAAGAGAATTGAAAATAGCTGGGAGATTCTTCTCATTG 6264 || || || |||| || |||||||||||| || || | || || || || |||| Sbjct 2761 ATTATAGGGTTAAGGGCAAAAGAAAGAGAGTTCAAGCGTGAAGGTAGGTTTTTTGCATTA 2702 Query 6265 ATGTCATGGAGATTAAGGGAATATTTTGTGATCACGGAGTACTTAATCAA--AACATACT 6322 |||| ||| | |||||||| ||||||||||| || || |||||| | || |||||| | Sbjct 2701 ATGTTTTGGTGTTTAAGGGAGTATTTTGTGATAACAGAATACTTATTAAAAGAACATATT 2642 Query 6323 ACGTTCCCTTGTTTAAGGGGTTAACTATGGCAGATGAC 6360 | | || ||| | || ||||||||||||||||| Sbjct 2641 --CTCCTTTTTTTTGATGGCATAACTATGGCAGATGAC 2606 >seq64995 Length=2604 Score = 82.4 bits (90), Expect = 5e-12 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7267 TTATATCTAGATCCTTCAATCGGAGGAGTATGTGGTATGGCATTATCTCGGTTTTTAATC 7326 |||||||| || ||||| | || ||| ||| ||| | ||||| | | |||| ||| Sbjct 2227 TTATATCTGGACCCTTCTTTAGGGGGATTATCTGGAACATCATTAACAAGATTTTAAATA 2286 Query 7327 AGAGCATTTCCTGATCCGGTGACAGAGAGTCTCTCATTCTGGAAGTTTATCTATGAACAT 7386 ||| ||||||||||||| | ||||| ||| | ||||| ||||||| ||| ||| || || Sbjct 2287 AGATCATTTCCTGATCCAATTACAGAAAGTTTATCATTTTGGAAGTATATTTATAAAAAT 2346 >seq59951 Length=10275 Score = 82.4 bits (90), Expect = 5e-12 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 7267 TTATATCTAGATCCTTCAATCGGAGGAGTATGTGGTATGGCATTATCTCGGTTTTTAATC 7326 |||||| ||||||| ||| | || || || ||| | | || | || |||||||| Sbjct 1481 TTATATTTAGATCCGTCACTTGGTGGGCTAGCTGGAACTTCTCTAACGCGATTTTTAATT 1540 Query 7327 AGAGCATTTCCTGATCCGGTGACAGAGAGTCTCTCATTCTGGAAGTTTAT 7376 ||| |||||||||||||| | || || || |||||||| ||||||||||| Sbjct 1541 AGATCATTTCCTGATCCGATTACTGAAAGCCTCTCATTTTGGAAGTTTAT 1590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35440501219204