Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025255.1 Length=11135 Score E Sequences producing significant alignments: (Bits) Value seq5447 140 2e-29 seq64995 80.6 2e-11 >seq5447 Length=4366 Score = 140 bits (154), Expect = 2e-29 Identities = 436/668 (65%), Gaps = 34/668 (5%) Strand=Plus/Minus Query 6227 AAAGAAAATTGACGAAGAGGGGTTAGAGGATGATGATCTTGTCATAGGACTCAAAGGGAA 6286 ||||| || ||| |||| | ||||| ||||| || | || |||||||||| || Sbjct 2814 AAAGATAAATGATGAAG---GATTAGATAATGATAATTACATAATTGGACTCAAAGCTAA 2758 Query 6287 AGAGAGAGAATTAAAAATTGCGGGAAGATTCTTTTCTTTGATGTCCTGGAAGCTCAGAGA 6346 ||| |||||| ||||| | ||| |||| ||||| | ||||| ||| || | ||||| Sbjct 2757 AGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATGTCTTGGGAGATGAGAGA 2698 Query 6347 GTATTTTGTCATCACTGAGTATTTGATTAAGACGCACTTTGTCCCGATGTTTAAAGGGTT 6406 ||||| || | || || || | ||||| | | | | || | ||||| | || Sbjct 2697 ATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTTAATAGTTT 2638 Query 6407 GACCATGGCGGATGACTTGACAGCGGTGATAAAGAAGATGATGGACACATCTTCAGGACA 6466 |||| |||| ||||| |||||| | |||| |||||||||||||| | ||| | || Sbjct 2637 GACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATGGATATATCGAGATCCCA 2578 Query 6467 AGGCTTAGATAATTAT---GAATCCATTTGTATAGCCAACCATAT-TGACTATGAGAAGT 6522 | | || | | || |||| |||||||| |||||||| | || || || | Sbjct 2577 A---ATTGACACTGATACAAAATCAATTTGTATTGCCAACCACCTCGGATTACTCAAAAT 2521 Query 6523 GGAACAATCATCAAAGAAAAGAGTCGAACGGGCCCGTGTTCAAGGTGATGGGTCAATTCT 6582 ||||||| ||||||||| || | ||| || || || | || ||||| |||| Sbjct 2520 GGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTAATGGGGAAATTTG 2461 Query 6583 TGGGATATCCACGTCTGATTGA-GAGAACTCATGAATTTTTTGAGAAGAGTCTGATATAT 6641 | || ||||| | || ||| | | || ||||| ||||| | ||| | | || || Sbjct 2460 TAGGGTATCC-CAACTTATTTACCCGCACGCATGAGATTTTTCAAAAGTCTTTAATTTAC 2402 Query 6642 TACAATGGACGACCAGATC---------TGATGCGGGTTCGAGGAAATTCTCTAGTCAAC 6692 ||| | ||||||||| | | | | ||| || || ||||| Sbjct 2401 TACTGAGATAGACCAGATCAACTTATAGTAACCACAGATGGAGAAA----TCGAGTCACA 2346 Query 6693 GCCTCATCTTTAAATGTCTGCTGGGAGGGTCAAGCTGGGGGATTAGAAGGACTGCGACAG 6752 || || | || ||| | || |||| |||||| |||||||| ||| | || Sbjct 2345 AGGGGATTGTT-----TTTGTTGGAATGGGCAAGATGGGGGTTTAGAAGGGCTGAGGCAA 2291 Query 6753 AAGGGATGGAGTATTCTAAATTTGCTTGTCATTCAGAGAGAAGCAAAAATAAGGAACACC 6812 |||||||||||||| | ||||| || || || ||| ||| ||||| | || || Sbjct 2290 AAGGGATGGAGTATAGTTAATTTACTGGTTAT--AGATAGA--GTAAAATTCGAAATACA 2235 Query 6813 GCCGTGAAAGTGCTAGCTCAAGGTGACAATCAGGTGATATGTACTCAGTATAAAACGAAG 6872 || |||| | ||||| || || ||||| | || |||||||| || ||| || | Sbjct 2234 AAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTACTCAATACAAAGTGAGG 2175 Query 6873 AAATCCCG 6880 |||||||| Sbjct 2174 AAATCCCG 2167 >seq64995 Length=2604 Score = 80.6 bits (88), Expect = 2e-11 Identities = 98/130 (75%), Gaps = 4/130 (3%) Strand=Plus/Plus Query 7311 ACATTTAAA--TATTCTATGTTGTATCTGGATCCTTCGATAGGAGGAGTCTCCGGAATGT 7368 |||| |||| |||| ||| || |||||||| ||||| |||| ||| | || |||| | Sbjct 2209 ACATATAAAATTATT-TAT-TTATATCTGGACCCTTCTTTAGGGGGATTATCTGGAACAT 2266 Query 7369 CACTCTCGAGATTCCTCATAAGATCATTTCCAGATCCAGTGACAGAAAGTTTGGCGTTCT 7428 || | | ||||| |||||||||||||| |||||| | ||||||||||| | || | Sbjct 2267 CATTAACAAGATTTTAAATAAGATCATTTCCTGATCCAATTACAGAAAGTTTATCATTTT 2326 Query 7429 GGAAATTTAT 7438 |||| | ||| Sbjct 2327 GGAAGTATAT 2336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35478860199508