Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025341.1 Length=11139 Score E Sequences producing significant alignments: (Bits) Value seq5447 120 2e-23 >seq5447 Length=4366 Score = 120 bits (132), Expect = 2e-23 Identities = 449/686 (65%), Gaps = 41/686 (6%) Strand=Plus/Minus Query 6199 CAAAAGGAACCAATTGGCCTGAATTCCTCCACCAGGTGAATGAGACAGGCTTACCTGAGG 6258 |||||| || |||||||| |||||| | || || | ||||| ||| ||| | | | Sbjct 2845 CAAAAGAGACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATG 2786 Query 6259 ACTCATTG-ATCATCGGATTGAAAGGGAAAGAGAGAGAAGTGAAAGTAAAAGGACGGTTC 6317 | | ||| || || ||| | |||| ||||| |||||||| |||| | | || | | Sbjct 2785 A-TAATTACATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATAT 2727 Query 6318 TTTTCACTCATGTCGTGGAAACTAAGAGAATATTTTGTTGTCACAGAATACCTAATCAAA 6377 ||||| || ||||| ||| | | ||||||||||| || || || |||||||| || ||| Sbjct 2726 TTTTCCCTAATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAA 2667 Query 6378 GAACATTTCGTCCCTCTCTTCAATGGATTGACTATGGCGGATGACATGACCACCGTAATA 6437 || ||| | | ||||| || ||| | ||||| |||| ||||| |||| || | || Sbjct 2666 AAATATTACTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATT 2607 Query 6438 TCAAAACTAATGGATCGCACTCAGGGCCAAGGAGGAGAGGACTAC--ACCCAAGTTTGCA 6495 || | |||||| | || || | || | ||| | ||| |||| | Sbjct 2606 AAGAAGATGATGGAT-ATATCGAGATCCCAAATTGACACTGATACAAAATCAA-TTTGTA 2549 Query 6496 TTGCTAATCATATC-GATTATGAAAAGTGGAACAATCATCAGAGA----AAGCGTGCAAC 6550 |||| || || || ||||| ||| |||||||| ||||| ||| |||| |||| Sbjct 2548 TTGCCAACCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAAC 2489 Query 6551 CGGACCTGTGTTCATAGTCATGGGACAATTCCTTGGATTTCCTAAACTGATCTA-TAGAA 6609 || || || ||| ||||| |||| | || | ||| |||| || || | | Sbjct 2488 ----CCAGTATTTGAAGTAATGGGGAAATTTGTAGGGTATCC-CAACTTATTTACCCGCA 2434 Query 6610 CACATGAGTTCTTTGAA---TCTAGCTGGGTGTATTACAATGCTAGACCTGAT---TTAA 6663 | |||||| | ||| || ||| | | || ||| | |||||| ||| | | Sbjct 2433 CGCATGAGATTTTTCAAAAGTCT---TTAATTTACTACTGAGATAGACCAGATCAACTTA 2377 Query 6664 TGGTCATCCGAGATGGGAGATTAGAAAATCTAGGTCC--TGAAATAG--TTTGTTGGAAT 6719 | || | | |||| |||| ||||| || | | || | ||||||||||| Sbjct 2376 TAGTAACCACAGAT-GGAG------AAATCGAGTCACAAGGGGATTGTTTTTGTTGGAAT 2324 Query 6720 GGACAAGATGGGGGGTTAGAAGGGCTACGACAGAAAGGATGGACAGTGGTCGGGTTACTC 6779 || ||||||||||| ||||||||||| | || || ||||||| | || ||||| Sbjct 2323 GGGCAAGATGGGGGTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTG 2264 Query 6780 ATGATACGGAGAGAAGCTAGGGTTAGAAACACCGCTGTCAAGATACTGGCTCAGGGAGAT 6839 | ||| || ||| || || |||| || || | |||||||||||||| Sbjct 2263 GTTATA--GATAGA--GTAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGAT 2208 Query 6840 AATCAGGTGATTTGTTCTCAATATAA 6865 ||||| | |||||| ||||||| || Sbjct 2207 AATCAAGCCATTTGTACTCAATACAA 2182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35491646526276