Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025342.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq79413 131 1e-26 seq5447 114 9e-22 >seq79413 Length=4423 Score = 131 bits (144), Expect = 1e-26 Identities = 316/471 (67%), Gaps = 7/471 (1%) Strand=Plus/Plus Query 6186 ACTAATTGGCCGGAGTTCCTTGAGAAAGTTAATAACGAGGGCCTGCCTGCAAATGATCTC 6245 ||||||||||| ||||| || | ||||||||| | | || || | | |||| || Sbjct 931 ACTAATTGGCCAGAGTTTATTAAAAAAGTTAATGATGTTGGACTTGATCAAGATGAACTA 990 Query 6246 ATCATTGGGTTAAAAGGGAAAGAGCGTGAAGTAAAAATTAAGGGACGATTCTTCTCTTTG 6305 || || ||| | | || ||||| | ||| ||||| || | ||| ||| ||| | ||| Sbjct 991 ATTATAGGGCTTAGAGCTAAAGAAAGAGAA-TAAAAGTTGAAGGAAGATATTTCGCATTG 1049 Query 6306 ATGTCTTGGAGATTGAGGGAATATTTCGTTGTTACAGAATATCTTATAAAGGAGCATTTC 6365 ||||| ||| || | ||||| || ||| ||||||| ||||| ||||||| || | Sbjct 1050 ATGTCGTGGCCTTTATGAGAATACTTTGTTATTACAGAGTATCTATTAAAGGAATATATT 1109 Query 6366 GTCCCATTATTCAATGGGTTGACAATGGCAGATGACATGACGACAGTGATATCGAAATTG 6425 |||| ||||||| | | | ||||||||||| ||||| ||| |||| ||| || Sbjct 1110 CTCCCTTTATTCAGTAGCATAACAATGGCAGACGACATTGTGACCTTGATTAAAAAAATG 1169 Query 6426 ATGGACAGAACCCAAGGTCAGGGCGGAGA--GGACTACACACAAATCTGCATCGCCAATC 6483 || |||| || | ||| | | |||| | | | | || || || || ||||| | Sbjct 1170 ATTGACA-AATCTAAGCAACAGTCAGAGACTGCAGGAAAAAC-CATTTGTATTGCCAACC 1227 Query 6484 ACATTGACTATGAAAAATGGAACAATCATCAAAGAAAGGACGCCACCGGCCCTGTCTTTA 6543 | | ||||||| |||||||| ||||||||| | | || | || |||| Sbjct 1228 ATACTGACTATAGCAAATGGAATAATCATCAACGCTATGATAGTAATTATTGGGTTTTTA 1287 Query 6544 AGGTCATGGGACAGTTCTTGGGATTAC-CAAATTTAATCTATCGAACACATGAGTTCTTT 6602 |||| | || | || || |||| |||| | || || ||||||| ||||||||| Sbjct 1288 AGGTTTTAGGGTTGGCGTTTGG-TTACGAAAATCTTTTCAATAGAACACACGAGTTCTTT 1346 Query 6603 GAACAGAGCTGGATTTATTATAATGGTAGGCCTGATTTGATGGCAGTTGTT 6653 || | |||| |||| ||||| | | ||||| || ||| ||| ||| Sbjct 1347 CAAAAAAGCTTTTTTTACTATAAAGACCGCCCTGACTTAATGAAAGTAGTT 1397 >seq5447 Length=4366 Score = 114 bits (126), Expect = 9e-22 Identities = 384/590 (65%), Gaps = 21/590 (4%) Strand=Plus/Minus Query 6030 TGCTTCGATATTCCAGACGTCATTGACCCCAGTCTCCTTTATTCGGATAAAAGTCATTCT 6089 || || || |||||||| || ||||| |||||| ||||| ||||||||||||||| Sbjct 2993 TGTTTTGAAATTCCAGAAGTGATTGAACCCAGTTATATTTATAGTGATAAAAGTCATTCT 2934 Query 6090 AGGACTAGATCAGAAGTGATCAACTTCTTACAATTGCATCCCGGCGAAGTTATCCCCACA 6149 || | |||| || | || || |||| ||| |||| | ||| || | Sbjct 2933 TTAACAAAATCACAATTAATAAATCACTTAAGATTATATCCTAATAAGCCTATACCATCT 2874 Query 6150 GAGAAGGTGTTGAACACTCTTTTACATACTCCTGGGACTAATTGGCCGGAGTTCCTTGAG 6209 | || || || | | || || || | | ||| ||||||||||| ||| | | Sbjct 2873 CACAAAGTCTTATCTATTTTTATAAATTCAAAAGAGACAAATTGGCCGGAATTCTTACAA 2814 Query 6210 AAAGTTAATAACGAGGGCCTGCCTGCAAATGATCTCATCATTGGGTTAAAAGGGAAAGAG 6269 || | ||| | || || | | || || ||| ||||| | |||| ||||| Sbjct 2813 AAGATAAATGATGAAGGATTAGATAATGATAATTACATAATTGGACTCAAAGCTAAAGAA 2754 Query 6270 CGTGAAGTAAAAATTAAGGGACGATTCTTCTCTTTGATGTCTT-GGAGATTGAGGGAATA 6328 | ||||||||| |||| ||| || || | ||||||| ||||| |||| ||||| Sbjct 2753 AGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATGTCTTGGGAGA-TGAGAGAATA 2695 Query 6329 TTTCGTTGTTACAGAATATCTTATAAAGGAGCATTTCGTCCCATTATTCAATGGGTTGAC 6388 |||||| ||||| ||||| || || || | ||| | | || | || ||| | ||||| Sbjct 2694 TTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTTAATAGTTTGAC 2635 Query 6389 AATGGCAGATGACATGACGACAGTGATATCGAAATTGATGGA------CAGAACCCAAGG 6442 |||||||||| |||| ||| |||| ||| ||||||| ||| ||||| Sbjct 2634 CGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATGGATATATCGAGATCCCAAAT 2575 Query 6443 TCAGGGCGGAGAGGACTAC-ACACAAATCTGCATCGCCAATCACAT-TGACTATGAAAAA 6500 | || | ||| | | ||| || || ||||| ||| | || || |||| Sbjct 2574 T-------GACACTGATACAAAATCAATTTGTATTGCCAACCACCTCGGATTACTCAAAA 2522 Query 6501 TGGAACAATCATCAAAGAAAGGACGCCACCGGCCCTGTCTTTAAGGTCAT-GGGACAGTT 6559 |||||||| ||||||||| || |||| | ||| || ||| | || || |||| | || Sbjct 2521 TGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTAATGGGGAAATTT 2462 Query 6560 CTTGGGATTACCAAATTTAATCTA-TCGAACACATGAGTTCTTTGAACAG 6608 | ||| | |||| || || || || || |||||| | ||| || || Sbjct 2461 GTAGGGTATCCCAACTT--ATTTACCCGCACGCATGAGATTTTTCAAAAG 2414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35430911474128