Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025356.1 Length=11097 Score E Sequences producing significant alignments: (Bits) Value seq5447 161 7e-36 >seq5447 Length=4366 Score = 161 bits (178), Expect = 7e-36 Identities = 579/888 (65%), Gaps = 37/888 (4%) Strand=Plus/Minus Query 6272 ATGAAGAAGGATTACCCCGTGATAGTCTCATAATAGGACTAAAAGGGAAAGAAAGAGAAT 6331 |||| ||||||||| ||||| | |||||| ||||| |||| |||||||||||| Sbjct 2806 ATGATGAAGGATTAGATAATGATAATTACATAATTGGACTCAAAGCTAAAGAAAGAGAAG 2747 Query 6332 TGAAAATCGCCGGAAGATTCTTTTCCCTGATGTCCTGGCAACTGAGAGAATATTTTGTCA 6391 | ||| | || |||| |||||||| ||||| ||| | ||||||||||||| || Sbjct 2746 TAAAAGAAGAGGGTAGATATTTTTCCCTAATGTCTTGGGAGATGAGAGAATATTTCGTGG 2687 Query 6392 TCACCGAGTACTTAATAAAGACTCATTATGTACCATTATTCAAAGGACTCACAATGGCGG 6451 | ||||| ||| | || || | |||| |||| | || || | | || |||| | Sbjct 2686 TTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTTAATAGTTTGACCGTGGCAG 2627 Query 6452 ATGATCTGACATCAGTTGTAAAGAAGATGTTGGACAACACGA-AT-GGACAAGGACTGGA 6509 ||||| ||||| || | | ||||||||| |||| | ||| || | | ||| Sbjct 2626 ATGATTTGACAACATTGATTAAGAAGATGATGGATATATCGAGATCCCAAATTGAC--AC 2569 Query 6510 TGATTATTCATCGATTTGCATCGCCAATCACATC-GACTATGAGAAGTGGAATAATCATC 6568 |||| ||| ||||| || ||||| ||| || || || || ||||| || |||| Sbjct 2568 TGATACAAAATCAATTTGTATTGCCAACCACCTCGGATTACTCAAAATGGAACAACCATC 2509 Query 6569 AGAGAAAAGAATCCAATGGGCCTGTGTTTCGAGTCATGGGGCAGTTTTTGGGTTATCCCA 6628 | ||| ||| |||| || || ||| ||| |||||| | ||| | || ||||||| Sbjct 2508 AAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTAATGGGGAAATTTGTAGGGTATCCCA 2449 Query 6629 GATTGTTTGAAAGAACCCATGAGTTTTTTGAATCAAGCC--TCATTTACTACAACGGCAG 6686 || ||| | || |||||| ||||| || ||| | | ||||||||| | || Sbjct 2448 ACTTATTTACCCGCACGCATGAGATTTTTCAA--AAGTCTTTAATTTACTACTGAGATAG 2391 Query 6687 ACCAGACTTGATGGAT-GTAAGAGGAGATTCGTTGATCAATACCACTGAAAAG----TTG 6741 |||||| | | || |||| ||| | || ||| | | | | ||| ||| Sbjct 2390 ACCAGA-TCAACTTATAGTAACCACAGA----TGGAGAAAT-CGAGTCACAAGGGGATTG 2337 Query 6742 -GTGTGTTGGGAGGGTCAGGCGGGAGGATTGGAAGGATTGAGACAAAAAGGATGGAGTGT 6800 | |||||| | || || | || || || ||||| |||| ||||| ||||||||| | Sbjct 2336 TTTTTGTTGGAATGGGCAAGATGGGGGTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTAT 2277 Query 6801 GCTGAATCTGTTAGTCATAAACAGGGAATCATCCATAAGAAATACAATCGTGAAAGTACT 6860 | ||| | | || ||| | || | | || | ||||||||| || ||| | Sbjct 2276 AGTTAATTTACTGGTTATAGATAGAGTAAAATTC----GAAATACAAAAGTTGGAGTGTT 2221 Query 6861 AGCGCAGGGAGACAATCAGGTCATCTGTACTCAATATAAAACAAAAAATTACAAGAACGA 6920 || |||||||| ||||| | ||| ||||||||||| ||| | || | | Sbjct 2220 GGCTCAGGGAGATAATCAAGCCATTTGTACTCAATACAAAGTGAGGAAATCCCGTGTTTT 2161 Query 6921 GGAAGAGCTTAAAATGCTTTTATCTGCCATGGTAGATAACAATCAGACAATCATG--AAT 6978 | ||| |||| | || || || ||| | || |||||||| ||||| | Sbjct 2160 TAATGAGACTAAACAACATTACAATGAAATTGTACAAAATAATCAGACCGTCATGTCAGC 2101 Query 6979 AGTATCGTGACAGGGACAGGTAAGTTGGGATTGATCATAAATAATGATGAGACCATGCAA 7038 | || | || |||| || ||||| || ||||| || || || ||||| || || ||| Sbjct 2100 AATAGC-TG-CAGGAACCACAAAGTTAGGTTTGATAATCAACAAAGATGAAACTATTCAA 2043 Query 7039 TCTGCAGATTACCTTAAT----TACGGAAAAATGCCAGTCTTCCGAGGAATCCTAAGAGG 7094 ||| |||| ||| || || || ||||| || | | ||| | |||| || Sbjct 2042 TCT----ATTAACTTCATCATCTATGGGAAAATACCTATAATTAAGGGAGTGATAAGGGG 1987 Query 7095 ATTAGAGACTAAAAGATGGTCCAGGGTCACATGCATCACGAATGATCA 7142 ||| || | ||| || ||| | || |||||||| |||||||| || Sbjct 1986 ATTGGATATTAAGAGGTGGAGTCGTGTAACATGCATAACGAATGACCA 1939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35357390095212