Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025358.1 Length=15024 Score E Sequences producing significant alignments: (Bits) Value seq5447 196 5e-46 seq64995 91.5 1e-14 >seq5447 Length=4366 Score = 196 bits (216), Expect = 5e-46 Identities = 442/654 (68%), Gaps = 13/654 (2%) Strand=Plus/Minus Query 10089 ACGAATTGGCCTGAATTTCTTAAAGCA-ATTAATGATCACGGACTAGATTGGGAAAAATT 10147 || |||||||| ||||| |||| | | || |||||| | ||| ||||| || || | Sbjct 2837 ACAAATTGGCCGGAATT-CTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTA 2779 Query 10148 GGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCTTT 10207 | ||||| | |||||||| ||| ||||| | |||||||| ||||||| ||||| | Sbjct 2778 CATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCT 2719 Query 10208 AATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATACCTGATCAAGAAATATTT 10267 |||||||| || |||| || ||||| || ||| |||||||| || || ||||||| Sbjct 2718 AATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTA 2659 Query 10268 TGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAGAT 10327 |||| | ||| | || | || |||| |||||||||| ||| | ||||||||||| Sbjct 2658 CTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGAT 2599 Query 10328 GTTGGATGTCTCAAGCGGCCAGGGAACCAGAGA-ATATGATTATATAACTATTGCAAACA 10386 | ||||| | || || ||| || || | | || | || |||||| ||| Sbjct 2598 GATGGATATATCGAGATCCCAAATTGACACTGATACAAAATCA-ATTTGTATTGCCAACC 2540 Query 10387 ACATC-GATTATGAAAAATGGAATAATTATCAAAGGATAGAGTCTAACGGTCCAGTATTT 10445 || || ||||| ||||||||| || ||||||| || | ||| ||||||||| Sbjct 2539 ACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTT 2480 Query 10446 ACTGTCATGGGAAAATTTTTGGGGCTACCTAATCTCTTTACAAGAACTCATGAATTCTTC 10505 || ||||| |||||| | ||| || || | ||||| | || ||||| | || Sbjct 2479 GAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTTT 2420 Query 10506 CAAAAAAGCTTGATTTATTATAACCAAAGGCCTGATTTAATGATGGTGAGAGGTAATGAA 10565 ||||| || ||||| || | || || ||| | | || || | ||| | Sbjct 2419 CAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGATGGA 2360 Query 10566 TGTCTCAA--CAAATCTGGAGTAAAAGTATGTTGGGAGGGCCAAAAAGGGGGTTTGGAGG 10623 || | || | ||| | | |||||| | || ||| | |||||||| || | Sbjct 2359 GAAATCGAGTCACAAGGGGATT--GTTTTTGTTGGAATGGGCAAGATGGGGGTTTAGAAG 2302 Query 10624 GACTAAGACAAAAAGGATGGAGTATTTTAAATTATTTGATGATTGAAAGAGAGAGCAGGA 10683 | || || ||||| |||||||||| || | |||| || || | ||| |||| | | Sbjct 2301 GGCTGAGGCAAAAGGGATGGAGTA---TAGTTAATTTACTGGTT-ATAGATAGAGTAAAA 2246 Query 10684 TTCGAAATACAAAGGTCAAAATATTGGCACAGGGGGATAATCAAACAATTAGTA 10737 ||||||||||||| || | | ||||| ||||| ||||||||| | ||| ||| Sbjct 2245 TTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTA 2192 >seq64995 Length=2604 Score = 91.5 bits (100), Expect = 1e-14 Identities = 170/249 (68%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 10086 GCTACGAATTGGCCTGAATTTCTTAAAGCAATTAATGATCACGGACTAGATTGGGAAAAA 10145 ||||| | ||||| ||||| | ||| | | |||||| | ||| | | || | Sbjct 1106 GCTACCGACTGGCCCAAATTTTTAAAAAGAGTAAATGATTAGGGATTGAGTAAAGATGAG 1165 Query 10146 TTGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCT 10205 || | || ||||||| |||||| || |||| ||||| |||| ||||||||||| Sbjct 1166 TTAATAATAGGGTTGAGAGCTAAAGA--GAGAGGTTAAAAGAGAACGTAGATTCTTTGTA 1223 Query 10206 TTAATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATACCTGATCAAGAAATAT 10265 || ||||||| || || ||||||||||| || || ||||| | ||| || | Sbjct 1224 TTGATGTCTTGGACTTTAAGAGATTATTTTGTCATAACAGAGTACCTTTTAAAGGAACAC 1283 Query 10266 TTTGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAG 10325 | | || |||||| || || |||| |||||||||||| | ||| ||| ||||| Sbjct 1284 ATACTTCCATTATTTAAAAGTATAACTATGGCTGATGATATAGTTACCTTAACCAAGAAA 1343 Query 10326 ATGTTGGAT 10334 ||| | ||| Sbjct 1344 ATGCTAGAT 1352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47905746757393