Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025362.1 Length=12240 Score E Sequences producing significant alignments: (Bits) Value seq5447 111 1e-20 seq7507 89.7 4e-14 seq50365 87.8 1e-13 seq64995 78.8 7e-11 >seq5447 Length=4366 Score = 111 bits (122), Expect = 1e-20 Identities = 268/403 (67%), Gaps = 2/403 (0%) Strand=Plus/Minus Query 7392 TTCTTCCAAAAAGTCAATGATATAGGAATTCCTGACGATGCATTGATTATTGGTTTGAAA 7451 ||||| ||||| | |||||| |||| | | | ||| | || ||||| | ||| Sbjct 2822 TTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTACATAATTGGACTCAAA 2763 Query 7452 GCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttttttCACTTATGTCTTGGGAACTG 7511 || |||||||||||| | ||| || || |||| |||||| || ||||||||||| || Sbjct 2762 GCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATGTCTTGGGAGATG 2703 Query 7512 AGGGAGTATTTTGTATCTACTGAATACTTGATTAAGAAGCATTTTGTACCATTGTTTAAA 7571 || || ||||| || ||| |||||| | ||||| || ||| |||| | ||||| Sbjct 2702 AGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTTAAT 2643 Query 7572 GGCTTGACTATGGCTGATGGATTGATGACGGTAACTAAGAAAATGTTGGAGTCATCAATG 7631 | ||||| |||| |||| |||| || | | |||||| ||| |||| ||| | Sbjct 2642 AGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATGGATATATCGAGA 2583 Query 7632 GGACAGGGGAATCCTGATTATGAGACTGTGTCCATTGCTAACCATGTC-GATTATGAGAA 7690 || | ||||| | | | | ||||| ||||| || ||||| || Sbjct 2582 TCCCAAATTGACACTGATACAAAATCAATTTGTATTGCCAACCACCTCGGATTACTCAAA 2523 Query 7691 GTGGAACAACCACCAAAGAAGATTGTCAAATCAGGCAGTCTTTAGAGTCATGGGACAATT 7750 ||||||||||| |||||| | || | |||| ||| ||| ||||| |||| Sbjct 2522 ATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTAATGGGGAAATT 2463 Query 7751 TTTAGGTTACCCAAATTTGATAAGTCGCACCCATGA-ATTTTT 7792 | |||| || || || || | | ||||| ||||| |||||| Sbjct 2462 TGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTTT 2420 >seq7507 Length=4973 Score = 89.7 bits (98), Expect = 4e-14 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 7437 ATTATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttttttCACTT 7496 ||||| || || | |||||||||||||| | || || | ||| || |||||| || | Sbjct 2761 ATTATAGGGTTAAGGGCAAAAGAAAGAGAGTTCAAGCGTGAAGGTAGGTTTTTTGCATTA 2702 Query 7497 ATGTCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGA-AGCATTT 7555 |||| |||| | |||||||||||||| || |||||||| ||||| | | ||| | Sbjct 2701 ATGTTTTGGTGTTTAAGGGAGTATTTTGTGATAACAGAATACTT-ATTAAAAGAACATAT 2643 Query 7556 TGTACCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTAAGAAAAT 7615 | | | || ||| | ||| | |||||||| |||| | || | | || |||||||| Sbjct 2642 TCTCCTTTTTTTTGATGGCATAACTATGGCAGATGACATAATCGCTCTTACAAAGAAAAT 2583 Query 7616 GTTGGA 7621 ||| || Sbjct 2582 GTTAGA 2577 >seq50365 Length=2724 Score = 87.8 bits (96), Expect = 1e-13 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 7428 GATGCATTGATTATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAttt 7487 |||| || ||||| || || | ||||||||||||||| | ||| ||| ||||||| || Sbjct 1726 GATGAGTTAATTATAGGGTTAAGAGCAAAAGAAAGAGAGGTCAAAAGAGAAGGAAGAATT 1785 Query 7488 ttttCACTTATGTCTTGGGAACTGAGGGAGTATTT-TGTATCTACTGAATACTTGATTAA 7546 || | || ||||| |||| | | || ||||| | ||| |||||| || || | || Sbjct 1786 TTCGCCCTAATGTCATGGGCCTTACGAGAATATTTCTTTAT-TACTGAGTATTTACTGAA 1844 Query 7547 GAAGCATTTTGTACCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAAC 7606 | | ||| || |||| |||||| || | | || ||||| |||| | | || | || Sbjct 1845 GGAACATATTTTACCCTTGTTTGAAAGTATTACCATGGCAGATGATATAGTTACACTGAC 1904 Query 7607 TAAGAAAATGTTGGA 7621 ||| ||| | ||||| Sbjct 1905 TAAAAAATTATTGGA 1919 >seq64995 Length=2604 Score = 78.8 bits (86), Expect = 7e-11 Identities = 184/274 (67%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 7344 AGGGTCTTAAACACAATGTTGAATACACCTGCAACAGATTGGAAGAGTTTCTTCCAAAAA 7403 || || |||| ||| || |||| | |||| || || ||| | || || ||| | Sbjct 1076 AGAGTATTAATTTCAACTTTAAATAAAACTGCTACCGACTGGCCCAAATTTTTAAAAAGA 1135 Query 7404 GTCAATGATATAGGAATTCC-TGACGATGCATTGATTATTGGTTTGAAAGCAAAAGAAAG 7462 || |||||| |||| ||| | | |||| || || || || |||| ||| ||||| || Sbjct 1136 GTAAATGAT-TAGGGATTGAGTAAAGATGAGTTAATAATAGGGTTGAGAGCTAAAGAGAG 1194 Query 7463 AGAAATGAAACGAGTAGGAAGAtttttttCACTTATGTCTTGGGAACTGAGGGAGTATTT 7522 || | ||| ||| | | ||||| ||| | | ||||||||| | || || ||||| Sbjct 1195 AGG--TTAAAAGAGAACGTAGATTCTTTGTATTGATGTCTTGGACTTTAAGAGATTATTT 1252 Query 7523 TGTATCTACTGAATACTTGATTAAGAAGCATTTTGTACCATTGTTTAAAGGCTTGACTAT 7582 ||| || || ||| | | ||| | || | | ||||| |||||| | | ||||| Sbjct 1253 TGTCATAACAGAGTACCTTTTAAAGGAACACATACTTCCATTATTTAAAAGTATAACTAT 1312 Query 7583 GGCTGATGGATTGATGACGGTAACTAAGAAAATG 7616 |||||||| | | || |||| ||||||||| Sbjct 1313 GGCTGATGATATAGTTACCTTAACCAAGAAAATG 1346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39011082969168