Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025364.1 Length=11019 Score E Sequences producing significant alignments: (Bits) Value seq5447 129 4e-26 >seq5447 Length=4366 Score = 129 bits (142), Expect = 4e-26 Identities = 399/607 (66%), Gaps = 43/607 (7%) Strand=Plus/Minus Query 6186 AAAGGCAAGGAAAGAGAATTAAAAATAGCAGGTAGATTTTTCTCTCTCATGTCTTGGAAA 6245 |||| || ||||||||| ||||| || ||||||| ||| || || ||||||||| | Sbjct 2765 AAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATGTCTTGGGAG 2706 Query 6246 TTGAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGACACATTTTGTGCCTCTATTT 6305 |||| ||||| || ||| | || || ||| | ||||| | | ||| | ||||| ||| Sbjct 2705 ATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTT 2646 Query 6306 CATGGTCTCACCATGGCTGACGACATGACTGCAGTCATCAAAAAGATGTTGGAAAGCTC- 6364 || || | ||| |||| || || |||| || | || || |||||| |||| | || Sbjct 2645 AATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATGGATATATCG 2586 Query 6365 --ATC-----TGGACAAGGTTTGTTAGATTACTCAGCGGTATGCCTGGCCAACCATATAG 6417 ||| | |||| || || | | ||| | || | |||||||| | | Sbjct 2585 AGATCCCAAATTGACAC----TGATACAAAA-TCAA---TTTGTATTGCCAACCACCTCG 2534 Query 6418 -ATTATGAAAAATGGAACAATCACCAGCGAAAATTGTCAAACGGTCCTGTCTTCAAGGTC 6476 |||| |||||||||||| || || || | ||| || || || | || Sbjct 2533 GATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTA 2474 Query 6477 ATGGGCCAATTCCTTGGGTTTCCGAATCTAATATACA-GAACTCATGAATTTTTTGAGAA 6535 ||||| |||| | |||| ||| || || || ||| | || ||||| ||||| | | Sbjct 2473 ATGGGGAAATTTGTAGGGTATCCCAA-CTTATTTACCCGCACGCATGAGATTTTTCA--A 2417 Query 6536 AAGCCT--AATATATTACAATGGCAGGCCTGATCTCATGAGAGT---CAAAGATGACACT 6590 ||| || ||| || ||| | || || |||| | | ||| || ||||| Sbjct 2416 AAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGATG----- 2362 Query 6591 GTTGA-AAATGCAGGCACCACTCAGGTGT----GCTGGAATGGGCAGGCAGGAGGCTTGG 6645 || |||| || ||| | ||| | ||||||||||| | || || || | Sbjct 2361 ---GAGAAATCGAGTCACAAGGGGATTGTTTTTGTTGGAATGGGCAAGATGGGGGTTTAG 2305 Query 6646 AAGGTCTTCGTCAAAAGGGTTGGAGTATTCTAAATCTATTAGTGATTCAAAGGGAGGCTA 6705 |||| || | |||||||| |||||||| | ||| || | || || | || | || Sbjct 2304 AAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAGAG----TA 2249 Query 6706 AAATTCGAAATACTGCAGTGAAAGTATTGGCTCAGGGAGACAATCAAGTCATTTGCACTC 6765 ||||||||||||| ||| ||| |||||||||||||| ||||||| |||||| |||| Sbjct 2248 AAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTACTC 2189 Query 6766 AGTATAA 6772 | || || Sbjct 2188 AATACAA 2182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35108056723236