Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025371.1 Length=11082 Score E Sequences producing significant alignments: (Bits) Value seq3346 91.5 1e-14 seq7507 82.4 5e-12 >seq3346 Length=1548 Score = 91.5 bits (100), Expect = 1e-14 Identities = 274/413 (66%), Gaps = 20/413 (5%) Strand=Plus/Minus Query 6732 TTTGTTGGGAAGGCCAAGCAGGAGGGCTAGAAGGATTGAGGCAAAAAGGATGGAGCGTGT 6791 |||| ||||| || |||| || || || |||||||| || ||||| || ||||| | Sbjct 832 TTTGCTGGGATGGTCAAGATGGGGGACTTGAAGGATTAAGACAAAAGGGGTGGAGTATTG 773 Query 6792 TGAATCTACTAGTCATCAATAGAGAGT-CATCCATCAGGAA-CACGATAGTCAAAGTATT 6849 | ||| |||| | || ||||||| || || | ||| ||| | | | ||||| Sbjct 772 TTAATTTACTGATAATAGATAGAGAAAGCAA--ATTACGAAACACAAAAATTGGGGTATT 715 Query 6850 AGCTCAGGGAGACAATCAGGTCATATGCACCCAGTAC-AAGACAAAAAATTA---CA--A 6903 |||||| |||||||| || |||||||||||||| ||| ||| | ||||| | || Sbjct 714 AGCTCAAGGAGACAACCAAGTCATATGCACCCAATACAAAGTCCGAAAATCAAGGCATCC 655 Query 6904 GAATGAAGAAGAG-CTTAAGATGCTCTTGTCAGCCATGGTAGACAACAACCAAACTATCA 6962 ||||||| | || || | ||| | | || || | ||||| || ||| Sbjct 654 GAATGAAATAAAGTCTCATTATGAT-------GAAATTATAAAAAACAATAGTGCTGTCA 602 Query 6963 TGGATAGTATTGTGACAGGGACAGGCAAATTGGGACTAATCATCAACAATGATGAAACTA 7022 || ||| | ||| ||| ||||||||||| || || ||||| || ||||||| Sbjct 601 TGTCGGCAATTATAGAAGGAACATCAAAATTGGGACTCATAATTAACAAAGACGAAACTA 542 Query 7023 TGCAATCTGCTGATTATCTCAA-TTATGGAAAGATGCCAGTATTCCGAGGCATCCTACGA 7081 | |||||| | ||| ||| || |||||| || || ||| || | || | | || Sbjct 541 TACAATCTATTAATT-TCTTAATTTATGGGAAAATCCCAATAATAAAGGGGGTTATTAGA 483 Query 7082 GGGCTGGAGACTAAGAGATGGTCCAGAGTCACATGCATCACCAATGACCAAAT 7134 | || | ||| ||||| ||||| ||||| || || |||||||| || Sbjct 482 AATTTAGATATTAAACGATGGAGTAGAGTAACATGTATAACAAATGACCAGAT 430 >seq7507 Length=4973 Score = 82.4 bits (90), Expect = 5e-12 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 6215 TTAAACAACCCTGCGACAGATTGGCCATCCTTCCTGAAAGCGG-TAGACGAAGAAGGATT 6273 |||||||| |||| | |||||| || ||||| |||| || | |||||| |||| Sbjct 2836 TTAAACAAGAAATCGACTAACTGGCCAGATTTTCTGAA-GCGGATAAATGAAGAAAGATT 2778 Query 6274 ACCCCGTGACAGTCTCATCATAGGATTGAAGGGAAAAGAGAGAGAGTTAAAGATCGCCGG 6333 | | | || || ||||| || | || |||||| |||||||| ||| | || Sbjct 2777 AAGCAAGAATTCCCTAATTATAGGGTTAAGGGCAAAAGAAAGAGAGTTCAAGCGTGAAGG 2718 Query 6334 AAGGTTCTTTTCACTGATGTCTTGGCAGTTGAGAGAGTACTTTGTGATAACGGAATATCT 6393 ||||| ||| || | |||| |||| || || ||||| ||||||||||| ||||| || Sbjct 2717 TAGGTTTTTTGCATTAATGTTTTGGTGTTTAAGGGAGTATTTTGTGATAACAGAATA-CT 2659 Query 6394 GATTAAGA-CCCATTATGTTCCACTATTTAAAGGATTGACTATGGCAGATGAC 6445 ||||| | ||| | | | | ||| | || | ||||||||||||||| Sbjct 2658 TATTAAAAGAACATATTCTCCTTTTTTTTGATGGCATAACTATGGCAGATGAC 2606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35309441369832