Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025394.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq5447 131 1e-26 seq7507 84.2 2e-12 >seq5447 Length=4366 Score = 131 bits (144), Expect = 1e-26 Identities = 440/670 (66%), Gaps = 25/670 (4%) Strand=Plus/Minus Query 6201 ACAAATTGGATTGAATTCTTGGACATGGTCGATAAAGAAGGATTGCCGGAAGATGATCTG 6260 ||||||||| |||||||| | | | | || | |||||||| | ||| || Sbjct 2837 ACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTAC 2778 Query 6261 GTAATTGGACTCAAAGGGAAGGAAAGGGA-GTTGAAGATCGCAGGTCGATTCTTTTCGTT 6319 ||||||||||||||| || ||||| || || |||| | ||| ||| ||||| | Sbjct 2777 ATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAA-GAGGGTAGATATTTTTCCCT 2719 Query 6320 AATGTCTTGG-AGATTACGGGAATACTTTGTAATTACTGAGTATTTGATTAAAACACACT 6378 |||||||||| |||| | | ||||| || || |||| || || | ||||||| | | | Sbjct 2718 AATGTCTTGGGAGATGA-GAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATT 2660 Query 6379 TTGTTCCGTTATTTCATGGATTGACTATGGCAGATGATATGACGGCTGTGATCaaaaaaa 6438 | || | ||| || | ||||| ||||||||||| |||| | |||| || || | Sbjct 2659 ACTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGA 2600 Query 6439 TGATGGAGAGTTCATCAGGTCAGGGTCTCAACGATTATTCTTCAATATGTCTGGCTAATC 6498 ||||||| | || | || | || ||| ||||| ||| | || || | Sbjct 2599 TGATGGATATATCGAGATCCCAAATTGACACTGATACAAAATCAATTTGTATTGCCAACC 2540 Query 6499 ACATTG-ATTATGAGAAATGGAACAATCATCAGAGAAAAGAGTCAAATGGACCTGTTTTC 6557 || | | |||| ||||||||||| ||||| ||| || | || || || || Sbjct 2539 ACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTT 2480 Query 6558 CGTGTCATGGGTCAGTTCTTGGGATTTCCTAACCTTATAT-CCAGGACTCATGAATTCTT 6616 || ||||| | || | || | ||| ||| |||| | || | || ||||| | || Sbjct 2479 GAAGTAATGGGGAAATTTGTAGGGTATCCCAAC-TTATTTACCCGCACGCATGAGATTTT 2421 Query 6617 TGAAAAAAGTCTGATATATTACAATGGGAGACCAGATTTGATGAAAGTGC------AAGG 6670 | |||| | | || || ||| | ||||||||| | | ||| | || Sbjct 2420 TCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGATGG 2361 Query 6671 A-AATTCATTAGTCAATAACAGCAATCAGCGGGTATGTTGGAACGGACAGGCAGGAGGTT 6729 | || || ||||| || | | | | | |||||||| || || | || |||| Sbjct 2360 AGAAATCG--AGTCAC-AAGGGGATT----GTTTTTGTTGGAATGGGCAAGATGGGGGTT 2308 Query 6730 TGGAGGGCTTGAGGCAAAAGGGATGGAGTATTTTGAACCTATTGGTTATCCAGCGAGAAT 6789 | || || |||||||||||||||||||||| | || || ||||||| || ||| | Sbjct 2307 TAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTAT--AGATAGAGT 2250 Query 6790 CCAAGATCAGAAATACCGCAGTGAAGGTGTTGGCACAGGGTGATAATCAAGTAATCTGTA 6849 || || ||||||| ||| |||||||| ||||| |||||||||| || |||| Sbjct 2249 --AAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTA 2192 Query 6850 CTCAATACAA 6859 |||||||||| Sbjct 2191 CTCAATACAA 2182 >seq7507 Length=4973 Score = 84.2 bits (92), Expect = 2e-12 Identities = 328/502 (65%), Gaps = 28/502 (6%) Strand=Plus/Minus Query 6274 AAGGG--AAGGAAAGGGAGTTGAAGATCGCAGGTCGATTCTTTTCGTTAATGTCTTGGAG 6331 ||||| || ||||| ||||| ||| | |||| | || ||| | ||||||| |||| | Sbjct 2750 AAGGGCAAAAGAAAGAGAGTTCAAGCGTGAAGGTAGGTTTTTTGCATTAATGTTTTGGTG 2691 Query 6332 ATTACGGGAATACTTTGTAATTACTGAGTATTTGATTAAAACA-CACTTTGTTCCGTTAT 6390 ||| |||| || ||||| || || || || || ||||||| | || || | | || | Sbjct 2690 TTTAAGGGAGTATTTTGTGATAACAGAATACTT-ATTAAAAGAACATATTCTCCTTTTTT 2632 Query 6391 TTCATGGATTGACTATGGCAGATGATATGACGGCTGTGATCaaaaaaaTGATGGAGAGTT 6450 || |||| | |||||||||||||| || | ||| | | || |||||| | || | | Sbjct 2631 TTGATGGCATAACTATGGCAGATGACATAATCGCTCTTACAAAGAAAATGTTAGATAAAT 2572 Query 6451 C--ATCAGGTCAGGGTCTCAACGATTATTCTTCAATATGTCTGGCTAATCACATTGATTA 6508 | | ||| ||| | | | | | | |||||| | || ||||| ||||| Sbjct 2571 CGAAACAG--CAGTTTGTAACTGCAGACAAAACCATATGTATCGCCAATCATGCAGATTA 2514 Query 6509 TGAGAAATGGAACAATCATCAGAGAAAAGAGTCAAA----TGGACCTGTTTTCCGTGTCA 6564 | || |||||||||||||| || | ||| | || ||| || || | || Sbjct 2513 TAGCAAGTGGAACAATCATCAAAGTTATGAGACCAACTACTGG----GTGTTTAGGGTAT 2458 Query 6565 TGGGTCAGTTCTTGGGATTTCCTAACCT-TATATCCAGGACTCATGAATTCTTTGAAAAA 6623 || || | || || | | |||| | || | | |||||| |||||||| |||| Sbjct 2457 TGTGTTTGGCGTTTGGGTATGAACACCTGTTTAATC-GAACTCATTAATTCTTTCAAAAT 2399 Query 6624 AGTCTGATATATTACAATGGGAGACCAGATTTGATGAAAGTGCA-AGGAAATTCATTAGT 6682 ||| | | |||||||| | |||||| || | | |||||| | |||| | | || | Sbjct 2398 AGTTTTTTCTATTACAAGGATAGACCAAATCTATTAAAAGTGAAGAGGAGAATAAT--CT 2341 Query 6683 CAA----TAACAGCAATCAGCGGGTATGTTGGAACGGACAGGCAGGAGGTTTGGAGGGCT 6738 ||| ||| || | ||| | || |||||| | || || || || | ||||| | Sbjct 2340 CAAAGAGTAA-AGGATTCA--GAGTTTGTTGGGATGGTCAAAACGGGGGCTGTGAGGGAT 2284 Query 6739 TGAGGCAAAAGGGATGGAGTAT 6760 |||| |||| || ||||| || Sbjct 2283 TGAGACAAACTGGTTGGAGCAT 2262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35376569585364