Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025396.1 Length=15442 Score E Sequences producing significant alignments: (Bits) Value seq5447 141 9e-30 seq50365 107 2e-19 >seq5447 Length=4366 Score = 141 bits (156), Expect = 9e-30 Identities = 444/676 (66%), Gaps = 35/676 (5%) Strand=Plus/Minus Query 10521 ACAAATTGGCCAGAATTTTTACAAAAAGTGAATGATCATGGATTAGATTGGGAGAAGTTG 10580 ||||||||||| ||||| |||||||| | |||||| | ||||||||| || || | Sbjct 2837 ACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTAC 2778 Query 10581 GTGATAGGTTTAAAAGCCAAGGAAAGAGAGCTTAAAGAAGAAGGTAGGTTTTTCTCTTTA 10640 | || || | ||||| || |||||||| | |||||||| ||||| | ||| || || Sbjct 2777 ATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTA 2718 Query 10641 ATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTTGATTAAGAAATATTAT 10700 ||| || ||| | ||||| || || || | || |||||| | ||||| |||||||| Sbjct 2717 ATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTAC 2658 Query 10701 GTACCATTGTTTGAAGGACTTACAATGGCAGATGATTTGAACACTGTAATTAAAAAGATG 10760 |||| | ||| | | | || ||||||||||||||| || | ||||| |||||| Sbjct 2657 TTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATG 2598 Query 10761 CTGGACGTGTC---ATCCGGTCAAGGAACA---AGAAACTATGATTATGTATCCATAGCC 10814 |||| | || |||| || ||| | | | || | | ||| || ||| Sbjct 2597 ATGGATATATCGAGATCC--CAAATTGACACTGATACAAAATCAATTTGT----ATTGCC 2544 Query 10815 AACAACAT-TGATTATGAGAAATGGAATAATTATCAAAGGAAAGAATCAAATGGACCGGT 10873 ||| || | ||||| |||||||| || ||||||| ||| | || || || Sbjct 2543 AACCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGT 2484 Query 10874 ATTCAGAGTAATGGGACAATTCCT-TGGAATGGAAAATCTTATAGTT---CGGACACATG 10929 ||| ||||||||| |||| | || || || ||||| || || || |||| Sbjct 2483 ATTTGAAGTAATGGGGAAATTTGTAGGGTATCCCAA--CTTAT--TTACCCGCACGCATG 2428 Query 10930 AATTCTTTGAAAATAGTTTGGTCTATTATAACCAGCGAGCAGACTTAATGATGGT--GCA 10987 | | ||| |||| ||| | || || | || |||| | | || || || Sbjct 2427 AGATTTTTCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCA 2368 Query 10988 ---AGGGAGACATTGTTTAAATAAAACAGGAATCAAGGTGTGTTGGGAGGGTCAGAAGGG 11044 | ||||| || | | | | | || || | |||||| | || || | || Sbjct 2367 CAGATGGAGAAATCG----AGTCACAAGGGGAT-TGTTTTTGTTGGAATGGGCAAGATGG 2313 Query 11045 GGGATTAGAAGGGTTGAGGCAAAAAGGATGGAGTATATTGAATTATCTAATGATAGAGAG 11104 ||| ||||||||| |||||||||| |||||||||||| | |||| || | ||||| Sbjct 2312 GGGTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGA--- 2256 Query 11105 GGAGAGTAAGATAAGAAACACTAAGGTTAAAATTCTAGCTCAAGGGGACAATCAGACCAT 11164 ||||||| || |||| || || ||| | | | ||||| || || ||||| |||| Sbjct 2255 -TAGAGTAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCAT 2197 Query 11165 AAGTATGCATTACAAA 11180 ||| || |||||| Sbjct 2196 TTGTACTCAATACAAA 2181 >seq50365 Length=2724 Score = 107 bits (118), Expect = 2e-19 Identities = 160/221 (72%), Gaps = 7/221 (3%) Strand=Plus/Plus Query 10519 CAACAAATTGGCCAGAATTT-TTACAAAAAGTGAATGATCATGGATTAGATTGGGAGAAG 10577 |||| |||||||||| |||| |||| |||| | ||||| || | ||||| ||| || Sbjct 1674 CAACCAATTGGCCAGCATTTATTACCAAAA-TCAATGA-CAAAGTTTAGAACAGGATGAG 1731 Query 10578 TTGGTGATAGGTTTAAAAGCCAAGGAAAGAGAGCTTAAAGAAGAAGGTAGGTTTTTCTCT 10637 || | ||||| |||| ||| || ||||||||| | ||| |||||| || ||||| | Sbjct 1732 TTAATTATAGGGTTAAGAGCAAAAGAAAGAGAGGTCAAAAGAGAAGGAAGAATTTTCGCC 1791 Query 10638 TTAATGAGTTATGAG--TTAAGAGACTACTTTGTTGCAACTGAATACTTGATTAAGAAAT 10695 ||||| | ||| | ||| |||| || || || ||||| || || | ||| || Sbjct 1792 CTAATG--TCATGGGCCTTACGAGAATATTTCTTTATTACTGAGTATTTACTGAAGGAAC 1849 Query 10696 ATTATGTACCATTGTTTGAAGGACTTACAATGGCAGATGAT 10736 || | |||| ||||||||| | |||| |||||||||||| Sbjct 1850 ATATTTTACCCTTGTTTGAAAGTATTACCATGGCAGATGAT 1890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49241878214295