Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025400.1 Length=15444 Score E Sequences producing significant alignments: (Bits) Value seq5447 147 2e-31 >seq5447 Length=4366 Score = 147 bits (162), Expect = 2e-31 Identities = 440/670 (66%), Gaps = 25/670 (4%) Strand=Plus/Minus Query 10523 ACAAATTGGCCAGAATTTTTACAAAGGGTGAATGATCATGGATTAGATTGGGAGAAGTTG 10582 ||||||||||| ||||| ||||||| | | |||||| | ||||||||| || || | Sbjct 2837 ACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTAC 2778 Query 10583 GTGATAGGTTTAAAAGCCAAAGAAAGGGAGCTTAAAGAAGAAGGCAGGTTTTTCTCTTTA 10642 | || || | ||||| |||||||| || | |||||||| || || | ||| || || Sbjct 2777 ATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTA 2718 Query 10643 ATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTTGATCAAAAAATATTAT 10702 ||| || ||| | ||||| || || || | || |||||| | || ||||||||||| Sbjct 2717 ATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTAC 2658 Query 10703 GTACCATTATTCGAAGGACTTACAATGGCGGATGATTTGAATACAGTCATCAAAAAGATG 10762 |||| | || | | | || |||| |||||||||| ||| | || || |||||| Sbjct 2657 TTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATG 2598 Query 10763 CTGGATGTGTC---CTCCGGCCAAGGAACA-AGAAACTATGATTATGTGTCAATAGCTAA 10818 ||||| | || ||| | || ||| || || | || ||| || || || Sbjct 2597 ATGGATATATCGAGATCC--CAAATTGACACTGATACAAAATCAATTTGT--ATTGCCAA 2542 Query 10819 CAATAT-TGATTATGAAAAATGGAATAATTATCAAAGAAAAGAATCAAATGGACCAGTAT 10877 | | | ||||| ||||||||| || |||||||| ||| | || ||||||| Sbjct 2541 CCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTAT 2482 Query 10878 TCAGAGTAATGGGGCAATTCCT-TGGAATGGAAAATTTGATAGTTCGGACACATGAATTC 10936 | |||||||||| |||| | || || || || || || || ||||| | Sbjct 2481 TTGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTA-CCCGCACGCATGAGATT 2423 Query 10937 TTTGAAAATAGTTTGGTTTATTATAACCAGCGAGCAGATTTAATGATGGTA--CA---AG 10991 ||| |||| ||| |||| || | || ||||| | | || ||| || | Sbjct 2422 TTTCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGAT 2363 Query 10992 GAAGAAATTGTTTAAACAGAACAGGAACCAAGGTGTGTTGGGAGGGTCAAAAAGGGGGAT 11051 | |||||| | | || || ||| | |||||| | || ||| | ||||| | Sbjct 2362 GGAGAAATCG---AGTCACAAGGGGA--TTGTTTTTGTTGGAATGGGCAAGATGGGGGTT 2308 Query 11052 TAGAGGGGCTGAGGCAAAAGGGATGGAGCATATTGAATTATTTAATGATANNNNNNNNNN 11111 |||| ||||||||||||||||||||||| ||| | |||| | | ||| Sbjct 2307 TAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATA----GATAGA 2252 Query 11112 NTAAGATAAGAAATACCAAAGTTAAAATATTAGCTCAAGGAGACAATCAGACTATAAGTA 11171 ||| || ||||||| |||||| | | || ||||| ||||| ||||| | || ||| Sbjct 2251 GTAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTA 2192 Query 11172 TGCATTACAA 11181 || ||||| Sbjct 2191 CTCAATACAA 2182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49248271187773