Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025405.1 Length=11124 Score E Sequences producing significant alignments: (Bits) Value seq5447 134 1e-27 seq64995 82.4 5e-12 >seq5447 Length=4366 Score = 134 bits (148), Expect = 1e-27 Identities = 374/558 (67%), Gaps = 22/558 (4%) Strand=Plus/Minus Query 6246 TTCTTACAAGAGGTTAACGACCAGTGTTTCGAGAAAGATGATCTTATAATTGGATTGAGA 6305 ||||||||| || | || || | | || || || ||| || ||||||||| | | | Sbjct 2822 TTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTACATAATTGGACTCAAA 2763 Query 6306 GCAAAGGAGAGAGA-GTTGAAGAACAAAGGACGATTCTTTGCACTGATGTCTTGG-AGAC 6363 || || || ||||| || ||||| | | | ||| ||| | || ||||||||| ||| Sbjct 2762 GCTAAAGAAAGAGAAGTAAAAGAAGAGGGTA-GATATTTTTCCCTAATGTCTTGGGAGA- 2705 Query 6364 TTAGAGAATATTTTGTGGTCACAGAATATTTGATCAAAAAGCATTACATCCCTTTGTTCA 6423 | ||||||||||| ||||| || ||||| | || ||||| ||||| | ||| | || | Sbjct 2704 TGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTTA 2645 Query 6424 AAGGCTTGACCATGGCGGATGATCTAAATACAGTAATAGAAAAGATGATTCAGAGCACAA 6483 | | |||||| |||| |||||| | | ||| | || | |||||||| | | | | Sbjct 2644 ATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATGGATATATCGA 2585 Query 6484 GCGGTCATGATAGAGA-AGATAGCCGAA--GACTTGTCACCGTCTGCAACCATTTGGATT 6540 | || || || | |||| | || | |||| | | | | ||| | ||||| Sbjct 2584 GATCCCA-AATTGACACTGATA-CAAAATCAATTTGT-ATTGCCAACCACC--TCGGATT 2530 Query 6541 ATGAAAAATGGAACAACAATCAAAGGGATGAGTCAAACCATGCGGTATTCAAAGTGATGG 6600 | ||||||||||||| ||||||| | || | ||| | | ||||| |||| |||| Sbjct 2529 ACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTAATGG 2470 Query 6601 GCCAATTTTTAGGATTTCCCAATTTGATAACTAGAACCCATGAGATATTTCAGAAATCCC 6660 | ||||| |||| | |||||| || | || | || |||||||| ||||| || || Sbjct 2469 GGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTTTCAAAAGTCTT 2410 Query 6661 TTATTTATTTTGTAAATAGACCAG---ACCTCATGACAACCCAAAACGGAGAAAT--AAT 6715 | ||||| | | ||||||||| | || || |||| | | |||||||| | | Sbjct 2409 TAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGATGGAGAAATCGAGT 2350 Query 6716 CAACAGAACAGAACAACGAGTCTGCTGGCAAGGACAGGATGGAGGATTAGAAGGTTTAAG 6775 | ||| || | | | || ||| | || || ||||| || |||||||| | || Sbjct 2349 C-ACA----AGGGGATTGTTTTTGTTGGAATGGGCAAGATGGGGGTTTAGAAGGGCTGAG 2295 Query 6776 ACAAAAAGGTTGGACTAT 6793 ||||| || |||| ||| Sbjct 2294 GCAAAAGGGATGGAGTAT 2277 >seq64995 Length=2604 Score = 82.4 bits (90), Expect = 5e-12 Identities = 119/163 (73%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 6230 TACCAACTGGATGAAGTTCTTACAAGAGGTTAACGACCAGTGTTTCGAG-AAAGATGATC 6288 |||| ||||| || || ||| || || || || || | || ||| |||||||| Sbjct 1108 TACCGACTGGCCCAAATTTTTAAAAAGAGTAAATGATTAGGGATT-GAGTAAAGATGAGT 1166 Query 6289 TTATAATTGGATTGAGAGCAAAGGAGAGAGAGTTGAAGAACAAAGGACGATTCTTTGCAC 6348 | ||||| || |||||||| || ||||||| ||| || | || | | ||||||||| | Sbjct 1167 TAATAATAGGGTTGAGAGCTAAAGAGAGAG-GTTAAAAGAGAACGTA-GATTCTTTGTAT 1224 Query 6349 TGATGTCTTGGAGACTTAGAGAATATTTTGTGGTCACAGAATA 6391 |||||||||||| | ||||| |||||||| | ||||| || Sbjct 1225 TGATGTCTTGGACTTTAAGAGATTATTTTGTCATAACAGAGTA 1267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35443697800896