Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_028230.1 Length=12020 Score E Sequences producing significant alignments: (Bits) Value seq5447 140 2e-29 seq50365 96.9 3e-16 seq79413 82.4 6e-12 >seq5447 Length=4366 Score = 140 bits (154), Expect = 2e-29 Identities = 435/655 (66%), Gaps = 25/655 (4%) Strand=Plus/Minus Query 7131 ACAGATTGGAAAAAATTCTTCCAGCAAGTCAATGACGAAGGTTTACCAGATGATGTTTTG 7190 ||| ||||| ||||||| || | | ||||| ||||| ||| ||||| || Sbjct 2837 ACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTAC 2778 Query 7191 ATAATCGGATTAAAAGCAAAAGAAAGGGAGATGAAAAGAATCGGA-AGAtttttttCATT 7249 ||||| ||| | ||||| |||||||| || | ||||||| || |||| |||||| | Sbjct 2777 ATAATTGGACTCAAAGCTAAAGAAAGAGAAGT-AAAAGAAGAGGGTAGATATTTTTCCCT 2719 Query 7250 AATGTCTTGGGAATTAAGAGAATATTTTGTTTCTACTGAATATCTGATaaaaaaaTATTA 7309 |||||||||||| | ||||||||||| || ||| ||||| || || ||||||||||| Sbjct 2718 AATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTA 2659 Query 7310 TGTTCCATTATTCAAGGGATTGACAATGGCAGATGGATTAATGACAGTGGTGAAGAAAAT 7369 | || | || || | ||||| ||||||||| || | ||| || | ||||| || Sbjct 2658 CTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGAT 2599 Query 7370 GATTGATTCATCATGCGGGCAA--GGAAATCTAGATTACAACA-CTGTATCAATTGCCAA 7426 ||| ||| ||| | ||| || | || || ||||| | | | | |||||||| Sbjct 2598 GATGGATATATCGAGATCCCAAATTGACA-CT-GA-TACAAAATCAATTTGTATTGCCAA 2542 Query 7427 TCATAT-AGATTATACAAAGTGGAACAATCACCAGAGA-AGGAAGTCCAATCACCCTGTT 7484 || | ||||| |||| |||||||| || || ||| |||| |||| |||| || Sbjct 2541 CCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAG-CCAACAACCCAGTA 2483 Query 7485 TTTACTGTGATGGGACAGTTTTTGGGGTACCCGAACCTGATCACTAGAACTCATGAGTTC 7544 ||| || ||||| | ||| | ||||| || ||| | | || | || |||||| | Sbjct 2482 TTTGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATT 2423 Query 7545 TTCGAAAAAAGCTGGATATATTATGCAGGCCGAGCTGACAAAAT--TTGGACTGACGGAC 7602 || |||| | || || || || || | || || | | | | || || Sbjct 2422 TTTCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGAT 2363 Query 7603 GGAGGATATACAATCA-AGGATCAGGGA--AGTACTGTTGGGATGGACAAGCAGGTGGGT 7659 ||| || || | ||| | | |||| | |||||| |||| |||| || || | Sbjct 2362 GGA-GAAATCGAGTCACAAG----GGGATTGTTTTTGTTGGAATGGGCAAGATGGGGGTT 2308 Query 7660 TGGAAGGATTACGGCAAAAGGGGTGGACTATACTCAATTATTTGGTCATTGAGAGGGAAT 7719 | ||||| | |||||||||| |||| |||| | |||| |||| || || || | Sbjct 2307 TAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAGAG--- 2251 Query 7720 CTAAAAGAAGAAATACATTAATTAAGGTGTTAGCACAAGGGGACAATCAGACCAT 7774 ||||| |||||||| | || ||||| || || || || ||||| |||| Sbjct 2250 -TAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCAT 2197 >seq50365 Length=2724 Score = 96.9 bits (106), Expect = 3e-16 Identities = 180/257 (70%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 7121 TAAAGAAGCAACAGATTGGAAAAAATTCTT--CCAGCAAGTCAATGACGAAGGTTTACCA 7178 ||||||| |||| ||||| | ||| | ||| || |||||||| ||| |||| | Sbjct 1666 TAAAGAATCAACCAATTGGCCAGCATTTATTACCA--AAATCAATGACAAAG-TTTAGAA 1722 Query 7179 GATGATGTTTTGATAATCGGATTAAAAGCAAAAGAAAGGGAGATGAAAAGAATCGGAAGA 7238 | |||| || || || || |||| |||||||||||| ||| | |||||| |||||| Sbjct 1723 CAGGATGAGTTAATTATAGGGTTAAGAGCAAAAGAAAGAGAGGTCAAAAGAGAAGGAAGA 1782 Query 7239 tttttttCATTAATGTCTTGGGAATTAAGAGAATATTTTGTTTCTACTGAATATCTGATa 7298 |||| | ||||||| |||| ||| |||||||||| || |||||| ||| | | Sbjct 1783 ATTTTCGCCCTAATGTCATGGGCCTTACGAGAATATTTCTTTATTACTGAGTATTTACTG 1842 Query 7299 aaaaaaTATTATGTTCCATT-ATTCAAGGGATTGACAATGGCAGATGGATTAATGACAGT 7357 || || || | | || || || || | ||| || |||||||||| || | ||| | Sbjct 1843 AAGGAACATATTTTACCCTTGTTTGAAAGTATT-ACCATGGCAGATGATATAGTTACACT 1901 Query 7358 GGTGAAGAAAATGATTG 7374 | || ||||| |||| Sbjct 1902 GACTAA-AAAATTATTG 1917 >seq79413 Length=4423 Score = 82.4 bits (90), Expect = 6e-12 Identities = 124/173 (72%), Gaps = 5/173 (3%) Strand=Plus/Plus Query 7205 AGCAAAAGAAAGGGAGATGAAAA--GAATCGGAAGAtttttttCATTAATGTCTTGGGAA 7262 ||| |||||||| || || ||| ||| ||||||| ||| |||| ||||| ||| Sbjct 1005 AGCTAAAGAAAGAGA-ATAAAAGTTGAA--GGAAGATATTTCGCATTGATGTCGTGGCCT 1061 Query 7263 TTAAGAGAATATTTTGTTTCTACTGAATATCTGATaaaaaaaTATTATGTTCCATTATTC 7322 ||| ||||||| |||||| ||| || ||||| |||| ||||| | | || |||||| Sbjct 1062 TTATGAGAATACTTTGTTATTACAGAGTATCTATTAAAGGAATATATTCTCCCTTTATTC 1121 Query 7323 AAGGGATTGACAATGGCAGATGGATTAATGACAGTGGTGAAGAAAATGATTGA 7375 | | | ||||||||||| | | |||| || | || ||||||||||| Sbjct 1122 AGTAGCATAACAATGGCAGACGACATTGTGACCTTGATTAAAAAAATGATTGA 1174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38307834996928