Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_028232.1 Length=11214 Score E Sequences producing significant alignments: (Bits) Value seq5447 105 5e-19 >seq5447 Length=4366 Score = 105 bits (116), Expect = 5e-19 Identities = 394/604 (65%), Gaps = 23/604 (4%) Strand=Plus/Minus Query 6383 TAATTGGACTCAAAGCAAAAGAAAGAGAGCTAAAAATTATCGGGAGGTATTTCGCTCTCT 6442 |||||||||||||||| ||||||||||| ||||| || || ||||| | || Sbjct 2776 TAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAA 2717 Query 6443 TGTCATGGAAGTTGAGAGAATATTTTGTGATAACAGAGTATTTGATCAAGACTAATTTCA 6502 |||| ||| || ||||||||||||| ||| | || || || | || || | ||| | Sbjct 2716 TGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACT 2657 Query 6503 TTCACTTGTATGATGGTCTGACAATGGCAGATGATTTAAAAGGGGTCATGATGAAATTGC 6562 | | | | | || || |||| ||||||||||||| | | | || | ||| || Sbjct 2656 TACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGA 2597 Query 6563 TCAGTAGGTCTGACGGTC---AAGGGACATCAGATTACAGTAGC-ATAACCATTGCCAAC 6618 | || || || | || || |||| | || |||| | | || ||||||||| Sbjct 2596 TGGATATATC-GA-GATCCCAAATTGACA-CTGA-TACAAAATCAATTTGTATTGCCAAC 2541 Query 6619 CACAT-TGACTATTCTAAGTGGAACAATCATCAAAGAAAAGAATCAAACAAATATGTCTT 6677 ||| | || || || || |||||||| ||||||||| ||| | ||||| || || Sbjct 2540 CACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATT 2481 Query 6678 CCGAGTGATGGGTCAGTTCATGGGATATCCGAATTTGTTCGAAAGGACACACGAGTTTTT 6737 ||| ||||| | || | || ||||| || || || | || || ||| |||| Sbjct 2480 TGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTT 2421 Query 6738 TGAAAAGAGCTTGATTTATTATGCAGGAGATAGATC---TCTCCTTAGAGCAACTAGTCG 6794 | ||||| || ||||| || |||||||| | || |||| || ||| | | Sbjct 2420 TCAAAAGTCTTTAATTTACTA---CTGAGATAGACCAGATCAACTTATAGTAACCA-CAG 2365 Query 6795 CGGCATAGAACAAGCTACAA--GCATCAGAAGTTGTTGGAAAGGACAAGCAGGAGGACTA 6852 | | | | | || |||| | || | ||||||||| || |||| || || || Sbjct 2364 ATGGAGAAATCGAGTCACAAGGGGAT-TGTTTTTGTTGGAATGGGCAAGATGGGGGTTTA 2306 Query 6853 GAGGGCCTCAGACAAAAGGGCTGGTCAATCCTCAATGTGATCCTTTTAGATAGGATCAGC 6912 || || || || |||||||| ||| || | ||| | | || ||||||| || Sbjct 2305 GAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAG----AGT 2250 Query 6913 AGGAAACGTAATACCAGAATTAAACTGTTAGCTCAAGGCGACAATCAAATCATATGCACT 6972 | | || ||||| | | || | |||| ||||| || || |||||| ||| || ||| Sbjct 2249 AAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTACT 2190 Query 6973 CAAT 6976 |||| Sbjct 2189 CAAT 2186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35731390153176