Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_028234.1 Length=12162 Score E Sequences producing significant alignments: (Bits) Value seq5447 150 1e-32 seq7507 107 1e-19 >seq5447 Length=4366 Score = 150 bits (166), Expect = 1e-32 Identities = 406/611 (66%), Gaps = 25/611 (4%) Strand=Plus/Minus Query 7361 GGATTATCTGATGAAGATCTCTTGATTGGATTAAAGGCCAAAGAAAGAGAACTGAAAAGG 7420 |||||| | |||| || | | |||||| | || || |||||||||||| | ||||| Sbjct 2798 GGATTAGATAATGATAATTACATAATTGGACTCAAAGCTAAAGAAAGAGAAGT-AAAAGA 2740 Query 7421 AAAGG-TAGAtttttttCTCTAATGACTTGG-AGATTGAGAGAATACTTTGTTGCAACTG 7478 | ||| ||||| |||||| |||||| ||||| |||| ||||||||| || || | || | Sbjct 2739 AGAGGGTAGATATTTTTCCCTAATGTCTTGGGAGAT-GAGAGAATATTTCGTGGTTACCG 2681 Query 7479 AATTCCTGATTAAAAAACATTTTGTCCCTCTATTTGAGGGACTAACTATGGCAGATGATT 7538 ||| ||| ||||||||| ||| | ||||| ||| | | | || |||||||||||| Sbjct 2680 AATACCTCATTAAAAAATATTACTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATT 2621 Query 7539 TGATCACAGTTGTGaaaaaaaTGAT-------TCGA-AACTCAAATGGACAAGGATTAAA 7590 ||| ||| | | || || ||||| |||| | | ||||| |||| || || | Sbjct 2620 TGACAACATTGATTAAGAAGATGATGGATATATCGAGATCCCAAATTGACACTGA-TACA 2562 Query 7591 TGATTACAGTAGAATAACTATAGCAAATCATAT-TGATTATGAAAAGTGGAATAATCATC 7649 || ||| ||| || || || | ||||| ||| ||||| || |||| Sbjct 2561 AAAT-------CAATTTGTATTGCCAACCACCTCGGATTACTCAAAATGGAACAACCATC 2509 Query 7650 AAAGAAAGGAATCAAATAAATATGTTTTTAAAGTTATGGGGCAATTCTTAGGTTATCCTA 7709 ||||| ||| | || || || ||| |||| |||||| |||| |||| ||||| | Sbjct 2508 AAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTAATGGGGAAATTTGTAGGGTATCCCA 2449 Query 7710 ATTTAATTGTCAGAACCCATGAGTTTTTTGAAAAAAGTGTCATATACTACGCTGGGCGAG 7769 | ||| || | | || |||||| ||||| |||| | | || |||||| | || Sbjct 2448 ACTTATTTACCCGCACGCATGAGATTTTTCAAAAGTCTTTAATTTACTACTGAGATAGAC 2389 Query 7770 CAGACTGGATAGGAGTAAAGAGAAATGAGTTTATAAATTTAACAGAACATAGATCATTTT 7829 |||| | ||||| | | ||| || | | | || || | | | || Sbjct 2388 CAGATCAACTTATAGTAACCACAGATGGAGAAATCGAGTCACAAGGGGATTGTTTTTGTT 2329 Query 7830 GGAATGGACAAAAAGGAGGACTAGAGGGATTAAGGCAAAAAGGGTGGTCCACTTTGAATT 7889 ||||||| ||| | || || |||| || | |||||||| || ||| | | |||| Sbjct 2328 GGAATGGGCAAGATGGGGGTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATT 2269 Query 7890 ACTTAGTTATTGAGAGAGAAAGCAATTTGAGAAATACAGATGTCAAAGTCTTAGCACAAG 7949 | ||||| || |||| || |||| |||||||| | || ||| || || || | Sbjct 2268 TACTGGTTATAGATAGAGTAA--AATT--CGAAATACAAAAGTTGGAGTGTTGGCTCAGG 2213 Query 7950 GAGATAATCAA 7960 ||||||||||| Sbjct 2212 GAGATAATCAA 2202 >seq7507 Length=4973 Score = 107 bits (118), Expect = 1e-19 Identities = 193/274 (70%), Gaps = 10/274 (4%) Strand=Plus/Minus Query 7385 ATTGGATTAAAGGCCAAAGAAAGAGAACTGAAAAGGAAAGGTAGAtttttttCTCTAATG 7444 || || |||| ||| ||||||||||| | || | ||||||| |||||| | ||||| Sbjct 2758 ATAGGGTTAAGGGCAAAAGAAAGAGAGTTCAAGCGTGAAGGTAGGTTTTTTGCATTAATG 2699 Query 7445 ACTTGGAGATTGAGAGAATACTTTGTTGCAACTGAATTCCTGATTAAAA-AACATTTTGT 7503 |||| | || || || || ||||| ||| |||| | | ||||||| ||||| || | Sbjct 2698 TTTTGGTGTTTAAGGGAGTATTTTGTGATAACAGAATACTT-ATTAAAAGAACATATTCT 2640 Query 7504 CCCTCTATTTGAGGGACTAACTATGGCAGATGATTTGATCACAGTTGTGaaaaaaaTGAT 7563 || | | ||||| || |||||||||||||||| | ||| | || || |||||| | Sbjct 2639 CCTTTTTTTTGATGGCATAACTATGGCAGATGACATAATCGCTCTTACAAAGAAAATG-T 2581 Query 7564 TCGA-AACTCAAATGGACA--AGGAT-TAAATGATTACAGTAGAATAACTATAGCAAATC 7619 | || || || || ||| || | ||| || ||| | ||| ||| || |||| Sbjct 2580 TAGATAAATCGAA---ACAGCAGTTTGTAACTGCAGACAAAACCATATGTATCGCCAATC 2524 Query 7620 ATATTGATTATGAAAAGTGGAATAATCATCAAAG 7653 || |||||| |||||||| ||||||||||| Sbjct 2523 ATGCAGATTATAGCAAGTGGAACAATCATCAAAG 2490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38761749597192