Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_028235.1 Length=12994 Score E Sequences producing significant alignments: (Bits) Value seq5447 181 9e-42 seq79413 122 7e-24 seq50365 111 1e-20 seq7507 111 1e-20 seq3346 78.8 8e-11 >seq5447 Length=4366 Score = 181 bits (200), Expect = 9e-42 Identities = 430/639 (67%), Gaps = 18/639 (3%) Strand=Plus/Minus Query 8183 ATTTTTACAAAAGATAAATGATGAAGGGTTAGATTTGGATTCTCTAATTATTGGGTTAAA 8242 ||| ||||||||||||||||||||||| |||||| ||| | || ||||| | || Sbjct 2823 ATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTACATAATTGGACTCAA 2764 Query 8243 AGCCAAAGAAAGAGAAATGAAGAGAATTGGG-AGAtttttttCATTAATGTCTTGGGAGT 8301 ||| |||||||||||| | || |||| ||| |||| |||||| |||||||||||||| Sbjct 2763 AGCTAAAGAAAGAGAAGTAAA-AGAAGAGGGTAGATATTTTTCCCTAATGTCTTGGGAGA 2705 Query 8302 TGAGAGAATATTTTGTATATACAGAGTATTTAATAAAGGAGTATTTTGTTCCATTATTCC 8361 ||||||||||||| || ||| || || | || || | |||| | || | || Sbjct 2704 TGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTTA 2645 Query 8362 ATGGCTTGACCATGGCAGATGACCTGCAGGAAGTTATTAAGAAAATGTTGGAGAATGTAA 8421 || | |||||| |||||||||| || | | |||||||| ||| |||| | | Sbjct 2644 ATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATGGATATATCGA 2585 Query 8422 GTGGACAAGGGTTGGATAAT--TAC-GAGTATATATCAATTGCGAATCATAT-TGATTAT 8477 | ||| | || | | ||| | | || | ||||| || || | ||||| Sbjct 2584 GATCCCAA---ATTGACACTGATACAAAATCAATTTGTATTGCCAACCACCTCGGATTAC 2528 Query 8478 GAAAAATGGAACAATCATCAACGATACGAATCTAATTGTCATATTTTTAAAGTTATGGGT 8537 |||||||||||| |||||| || |||| | || | | ||| |||| ||||| Sbjct 2527 TCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTAATGGGG 2468 Query 8538 CAATGTTTTGGTCTTCCCAATTTGTTTTTACGTTCTCATGAATTTTTTCAAAAAAGCCTG 8597 ||| | | || |||||| || ||| || | ||||| |||||||||| | Sbjct 2467 AAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTTTCAAAAGTCTTTA 2408 Query 8598 ATTTATTACAACCAACGACCTGATCTGATGATCCCCTTAGAAGACAGGCTGGAATCTATT 8657 ||||| ||| | |||| |||| | || | | | | | | | |||| | | Sbjct 2407 ATTTACTACTGAGATAGACCAGATCAACTTAT--AGTAACCACAGATGGAGAAATCGAGT 2350 Query 8658 GATCCCAGTCAACT-TGTTTGTTGGAATGGTCAAGCTGGAGGATTGGAAGGATTGAGGCA 8716 | | || | | | ||||||||||||| |||| ||| || || ||||| ||||||| Sbjct 2349 CA--CAAGGGGATTGTTTTTGTTGGAATGGGCAAGATGGGGGTTTAGAAGGGCTGAGGCA 2292 Query 8717 AAAGGGTTGGTCAATTGTAAATCTACTTGTTATAGAAAGAGAATCCAAAATTAGGAATAC 8776 |||||| ||| || || ||| |||| |||||||| |||| |||||| | ||||| Sbjct 2291 AAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAGAG----TAAAATTCGAAATAC 2236 Query 8777 GTTAGTCAAAATTTTGGCTCAAGGAGACAATCAGACCAT 8815 ||| | | |||||||| ||||| ||||| |||| Sbjct 2235 AAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCAT 2197 >seq79413 Length=4423 Score = 122 bits (134), Expect = 7e-24 Identities = 305/453 (67%), Gaps = 18/453 (4%) Strand=Plus/Plus Query 8184 TTTTTACAAAAGATAAATGATGAAGGGTTAGATTTGGATTCTCTAATTATTGGGTTAAAA 8243 || ||| ||||| ||| ||||| || | ||| ||| |||||||| ||| | | | Sbjct 947 TTATTAAAAAAGTTAA-TGATGTTGGACTTGATCAAGATGAACTAATTATAGGGCTTAGA 1005 Query 8244 GCCAAAGAAAGAGAAATGAAG-AGAATTGGGAGAtttttttCATTAATGTCTTGGGAGTT 8302 || |||||||||||| ||| ||| || |||| ||| |||| ||||| ||| || Sbjct 1006 GCTAAAGAAAGAGAATAAAAGTTGAA--GGAAGATATTTCGCATTGATGTCGTGGCCTTT 1063 Query 8303 GAGAGAATATTTTGTATATACAGAGTATTTAATAAAGGAGTATTTTGTTCCATTATTCCA 8362 ||||||| ||||| |||||||||| || ||||||| ||| || | || |||||| Sbjct 1064 ATGAGAATACTTTGTTATTACAGAGTATCTATTAAAGGAATATATTCTCCCTTTATTCAG 1123 Query 8363 TGGCTTGACCATGGCAGATGACCTGCAGGAAGTTATTAAGAAAATG-TTGGAGAATGTAA 8421 | || | || |||||||| ||| | | | ||||| |||||| ||| ||| ||| Sbjct 1124 TAGCATAACAATGGCAGACGACATTGTGACCTTGATTAAAAAAATGATTGACAAATCTAA 1183 Query 8422 GTGGACAAGGGTTGGATAAT-TACGAGTA--TATATCAATTGCGAATCATATTGATTATG 8478 | ||| || || | | | || | || | ||||| || |||| ||| ||| Sbjct 1184 G----CAACAGTCAGAGACTGCAGGAAAAACCATTTGTATTGCCAACCATACTGACTATA 1239 Query 8479 AAAAATGGAACAATCATCAACGATACGAATCTAATTGTCATATTTTTAAAGTTAT-GGGT 8537 |||||||| ||||||||||| || || ||||| | ||||||| ||| | |||| Sbjct 1240 GCAAATGGAATAATCATCAACGCTATGATAGTAATTATTGGGTTTTTAAGGTTTTAGGGT 1299 Query 8538 CAATGTTTTGGTCTTCCCAATTTGTTTTTA--CGTTCTCATGAATTTTTTCAAAAAAGCC 8595 |||| | || | || | |||| | | | || || || |||||||||||| Sbjct 1300 TGGCGTTTGG---TTACGAAAATCTTTTCAATAGAACACACGAGTTCTTTCAAAAAAGCT 1356 Query 8596 TGATTTATTACAACCAACGACCTGATCTGATGA 8628 | |||| || || | || ||||| | |||| Sbjct 1357 TTTTTTACTATAAAGACCGCCCTGACTTAATGA 1389 >seq50365 Length=2724 Score = 111 bits (122), Expect = 1e-20 Identities = 236/342 (69%), Gaps = 13/342 (4%) Strand=Plus/Plus Query 8168 AACCAATTGGGTATCATTT-TTACAAAAGATAAATGATGAAGGGTTAGATTTGGATTCTC 8226 |||||||||| | ||||| |||| ||| || ||||| ||| ||||| |||| Sbjct 1675 AACCAATTGGCCAGCATTTATTACCAAA-ATCAATGACAAAGT-TTAGAACAGGATGAGT 1732 Query 8227 TAATTATTGGGTTAAAAGCCAAAGAAAGAGAAATGAAGAGAATTGGGAGAtttttttCAT 8286 ||||||| ||||||| ||| ||||||||||| | || ||| || ||| |||| | Sbjct 1733 TAATTATAGGGTTAAGAGCAAAAGAAAGAGAGGTCAAAAGAGAAGGAAGAATTTTCGCCC 1792 Query 8287 TAATGTCTTGGGAGTTGAGAGAATATTT-TGTATATACAGAGTATTTAATAAAGGAGTAT 8345 ||||||| |||| || |||||||||| | ||| ||| ||||||||| | ||||| || Sbjct 1793 TAATGTCATGGGCCTTACGAGAATATTTCTTTAT-TACTGAGTATTTACTGAAGGAACAT 1851 Query 8346 TTTGTTCCATTATTCCATGGCTTGACCATGGCAGATGACCTGCAGGAAGTTATTAAGAAA 8405 || | || || || | | | |||||||||||||| | | | | ||| ||| Sbjct 1852 ATTTTACCCTTGTTTGAAAGTATTACCATGGCAGATGATATAGTTACACTGACTAAAAAA 1911 Query 8406 ATGTTGGAGAA-TGTAAGTGGACAAGGGTTGGATAAT-TACGAGTA--TATATCAATTGC 8461 | ||||| || | ||| |||| | || | | | || | |||| || || Sbjct 1912 TTATTGGACAAGTCTAA----ACAACAATCTGAAACTGCAGGAAAAACCATATGTATCGC 1967 Query 8462 GAATCATATTGATTATGAAAAATGGAACAATCATCAACGATA 8503 |||||| ||||||| || |||||||||||||| ||||| Sbjct 1968 TAATCATGCTGATTATAGCAAGTGGAACAATCATCAGCGATA 2009 >seq7507 Length=4973 Score = 111 bits (122), Expect = 1e-20 Identities = 160/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 8195 GATAAATGATGAAGGGTTAGATTTGGATTCTCTAATTATTGGGTTAAAAGCCAAAGAAAG 8254 ||||||||| ||| | ||| | |||| |||||||| ||||||| || |||||||| Sbjct 2795 GATAAATGAAGAAAGATTAAGCAAGAATTCCCTAATTATAGGGTTAAGGGCAAAAGAAAG 2736 Query 8255 AGAAATGAAGAGAATTGGGAGAtttttttCATTAATGTCTTGGGAGTTGAGAGAATATTT 8314 ||| | ||| | || || |||||| ||||||||| |||| || || || ||||| Sbjct 2735 AGAGTTCAAGCGTGAAGGTAGGTTTTTTGCATTAATGTTTTGGTGTTTAAGGGAGTATTT 2676 Query 8315 TGT-ATATACAGAGTATTTAATAAAGGAGTATTTTGTTCCATTATTCCATGGCTTGACCA 8373 ||| ||| ||||| || ||| |||| || || || | | || || ||||| | || | Sbjct 2675 TGTGATA-ACAGAATACTTATTAAAAGAACATATTCTCCTTTTTTTTGATGGCATAACTA 2617 Query 8374 TGGCAGATGACCTGCAGGAAGTTATTAAGAAAATGTTGGAGAA 8416 ||||||||||| | | ||| ||||||||||| || || Sbjct 2616 TGGCAGATGACATAATCGCTCTTACAAAGAAAATGTTAGATAA 2574 >seq3346 Length=1548 Score = 78.8 bits (86), Expect = 8e-11 Identities = 99/136 (73%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 8674 TTTGTTGGAATGGTCAAGCTGGAGGATTGGAAGGATTGAGGCAAAAGGGTTGGTCAATTG 8733 |||| ||| ||||||||| ||| ||| | |||||||| || |||||||| ||| |||| Sbjct 832 TTTGCTGGGATGGTCAAGATGGGGGACTTGAAGGATTAAGACAAAAGGGGTGGAGTATTG 773 Query 8734 TAAATCTACTTGTTATAGAAAGAGAATCCAAAATTAGGAATACGTTAGTCAAAATTTTGG 8793 | ||| |||| | ||||| |||||| |||| | | || || | | | || | Sbjct 772 TTAATTTACTGATAATAGATAGAGAAAGCAAATTACGAAACACAAAAATTGGGGTATTAG 713 Query 8794 CTCAAGGAGACAATCA 8809 ||||||||||||| || Sbjct 712 CTCAAGGAGACAACCA 697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41421305564936