Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_028236.1 Length=11072 Score E Sequences producing significant alignments: (Bits) Value seq5447 145 5e-31 seq64995 78.8 7e-11 >seq5447 Length=4366 Score = 145 bits (160), Expect = 5e-31 Identities = 253/364 (70%), Gaps = 3/364 (1%) Strand=Plus/Minus Query 6224 ATCATCGGATTAAAGGGTAAGGAGAGAGAAGTCAAAGTAAAAGGAAGATTCTTTTCCCTG 6283 || || ||| | || | ||| || |||||||| |||| | | || |||| |||||||| Sbjct 2777 ATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTA 2718 Query 6284 ATGTCTTGGAAGCTGAGAGAGTATTTCGTGGTGACGGAGTACTTGATAAAGGAGCATTAC 6343 ||||||||| || ||||||| ||||||||||| || || ||| | || || | ||||| Sbjct 2717 ATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTAC 2658 Query 6344 GTTCCTTTATTTAATGGGCTGACAATGGCTGATGACATGACAACAGTTATATCCAAGCTG 6403 | ||| | |||||| | |||| |||| ||||| |||||||| | || ||| || Sbjct 2657 TTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATG 2598 Query 6404 ATGGATAGAACGCAGGGGCAAGGAGGGAGTGAT-TATTCTCAAATCTGTATTGCAAATCA 6462 ||||||| | || ||| | | |||| | || ||| |||||||| || || Sbjct 2597 ATGGATATATCGAGATCCCAAATTGACACTGATACAAAATC-AATTTGTATTGCCAACCA 2539 Query 6463 TAT-AGATTATGAGAAGTGGAACAATCACCAAAGAAAGGATGCCACTGGTCCAGTTTTCA 6521 | ||||| || |||||||| || |||||| || |||| ||||| || Sbjct 2538 CCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTG 2479 Query 6522 AAGTCATGGGTCAGTTTTTGGGGTATCCCAATTTAATATACCGGACACATGAATTCTTTG 6581 |||| ||||| | ||| | ||||||||||| ||| | ||| || ||||| | ||| Sbjct 2478 AAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTTTC 2419 Query 6582 AAAA 6585 |||| Sbjct 2418 AAAA 2415 >seq64995 Length=2604 Score = 78.8 bits (86), Expect = 7e-11 Identities = 101/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 6246 AGAGAGAAGTCAAAGTAAAAGGAAGATTCTTTTCCCTGATGTCTTGGAAGCTGAGAGAGT 6305 ||||||| || ||| | || | ||||||||| |||||||||||| | ||||| | Sbjct 1189 AGAGAGAGGTTAAAAGAGAACGTAGATTCTTTGTATTGATGTCTTGGACTTTAAGAGATT 1248 Query 6306 ATTTCGTGGTGACGGAGTACTTGATAAAGGAGCA-TTACGTTCCTTTATTTAATGGGCTG 6364 |||| || | || |||||| | ||||||| || ||| |||| |||||||| | | Sbjct 1249 ATTTTGTCATAACAGAGTACCTTTTAAAGGAACACATAC-TTCCATTATTTAAAAGTATA 1307 Query 6365 ACAATGGCTGATGACAT 6381 || ||||||||||| || Sbjct 1308 ACTATGGCTGATGATAT 1324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35277475552912