Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_028241.1 Length=14478 Score E Sequences producing significant alignments: (Bits) Value seq5447 168 6e-38 seq64995 100 3e-17 >seq5447 Length=4366 Score = 168 bits (186), Expect = 6e-38 Identities = 600/924 (65%), Gaps = 39/924 (4%) Strand=Plus/Minus Query 9574 ACAGATTGGCCGAAGTTCCTAGAAAGAGTAGATAAAT----ACGGGTTGGAT--TGGGAA 9627 ||| |||||||| | ||| || ||| |||||||| | || || ||| || || Sbjct 2837 ACAAATTGGCCGGAATTCTTACAAA----AGATAAATGATGAAGGATTAGATAATGATAA 2782 Query 9628 TCCTTGGTAATTGGCCTTAAAGGGAAAGAGAGGGAATTGAAAGAAGCCGGACGATTCTTT 9687 | | ||||||| || |||| ||||| || ||| | ||||||| || ||| ||| Sbjct 2781 T--TACATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTT 2724 Query 9688 TCCTTAATGTCCTGGGAATTAAGGGAATATTTCGTTGTAACTGAATTACTGATTAAACAA 9747 ||| ||||||| ||||| | || ||||||||||| || || |||| || |||||| || Sbjct 2723 TCCCTAATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAA 2664 Query 9748 CATTATGTAAAGTTGTTCAAAGGTTTGACCATGGCAGATGATCTCCAAACTGTCATAAAG 9807 |||| || | || || |||||||| ||||||||||| | ||| | || ||| Sbjct 2663 TATTACTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAG 2604 Query 9808 AAAATGCTTGATACCTC-ACATGGTCAGGGAACCCGTACATATGATGCCATCACCATTGC 9866 || ||| | |||| || | || | || | | | | || | || ||||| Sbjct 2603 AAGATGATGGATATATCGAGATCCCAAATTGACACTGATACAAAAT-CAATTTGTATTGC 2545 Query 9867 CAATAACAT-AGACTATGAAAAATGGAATAATTATCAGAGAATGGAATCAAACGGTCCTG 9925 ||| || | || || ||||||||| || |||| ||| ||| | ||| || | Sbjct 2544 CAACCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAG 2485 Query 9926 TATTCAGAGTAATGGGTCAATTCTTGGGATATCCTAATTTGATACTCAGGACCCATGAGT 9985 |||| ||||||||| |||| | || ||||| || || | | | || |||||| Sbjct 2484 TATTTGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGA 2425 Query 9986 TTTTTCAGAAAAGTTTAATTTATTATAATCAAAGACCTGATTTGATGAGAGT------AG 10039 ||||||| || ||||||||| || | ||||| ||| | | ||| || Sbjct 2424 TTTTTCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAG 2365 Query 10040 TTGGGAAAAGTGCTATGAACAGTACTAAACATATCG--TGTGCTGGGAAGGGC-AGCTGG 10096 ||| ||| | ||| || || | | || ||| | |||| || ||| Sbjct 2364 ATGGAGAAATCG--------AGTCACAAGGGGATTGTTTTTGTTGGAATGGGCAAGATGG 2313 Query 10097 GTGGTTTAGAAGGGCTGAGACAAAAGGGGTGGAGTGTTGTCAATTATTTAATGATTGAAC 10156 | ||||||||||||||||| |||||||| |||||| | || | ||||| || || | Sbjct 2312 G-GGTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGT---TAATTTACTGGTT-ATA 2258 Query 10157 GAGAATCTAAAGTAAGAAACACCTTAGTGAAAGTGTTGGCTCAGGGAGACAACCAAACGA 10216 || | |||| | |||| || ||| |||||||||||||||||| || ||| | | Sbjct 2257 GATAGAGTAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCA 2198 Query 10217 TTACAACCCACTATAAAACTGA-GACATGGAGAAATGAGGAGGAGCTTAAGTCACATATT 10275 || || || || ||| ||| || || | | | ||| ||| |||| Sbjct 2197 TTTGTACTCAATA-CAAAGTGAGGAAATCCCGTGTTTTTAATGAGACTAAACAACATTAC 2139 Query 10276 AATAGGATGGTAGAAAATAACAAAGCAATTATGGACAATATAATTGCCGGAACCATGAAG 10335 ||| || ||| ||||||| | | | ||| ||| ||| ||||||| ||| Sbjct 2138 AATGAAATTGTACAAAATAATCAGACCGTCATGTCAGCAATAGCTGCAGGAACCACAAAG 2079 Query 10336 TTAGGGTTGAAAATTAATGAGGATGAGACTATGCAATCAGCCGATTACATTAACTATGGG 10395 ||||| |||| ||| || | ||||| ||||| ||||| | | ||| | ||||||| Sbjct 2078 TTAGGTTTGATAATCAACAAAGATGAAACTATTCAATCTATTAACTTCATCATCTATGGG 2019 Query 10396 AAGGTACCTATTATTGAAGGGGTCATAAGAGGTCTTAACACAAAGAGGTGGTCCCGAGTG 10455 || ||||||| ||| | || || ||||| || | | | ||||||||| || || Sbjct 2018 AAAATACCTATAATTAAGGGAGTGATAAGGGGATTGGATATTAAGAGGTGGAGTCGTGTA 1959 Query 10456 AATTTTGTGACAAATGATCAAGTC 10479 | | | || ||||| |||||| Sbjct 1958 ACATGCATAACGAATGACCAAGTC 1935 >seq64995 Length=2604 Score = 100 bits (110), Expect = 3e-17 Identities = 309/473 (65%), Gaps = 4/473 (1%) Strand=Plus/Plus Query 9349 AACACATGGCCCACTCAAGGCGTCATTGATGAATTCGGTGATAAATGGCACACCTTACCA 9408 |||| |||||| | ||| ||||| |||| ||| ||| |||||| | || ||| Sbjct 884 AACATTTGGCCCTCCCAACAAGTCATAAATGAGCATGGTTATATATGGCATAAGTTGCCA 943 Query 9409 TTAACCAAATGTTTTGATGTTCCCGATATGATTGATCCAAGTATGATCTATAGTGACAAA 9468 ||| |||||| |||||| |||| |||||| ||||||| | || || |||| ||| || Sbjct 944 ATAATCAAATGCTTTGATATTCCAGATATGTTTGATCCTACTAATATATATAATGATAAG 1003 Query 9469 TCACACTCTATGCAAAGAAGTGAAGTGTTGGAATGTATACAAAATCATTCAGATAAACCA 9528 |||| |||| | ||| || || || ||||||| || || ||||||| Sbjct 1004 AGTCACTTTATGACTTATACAGAACTGGTGAAACATATACAATGAAATCCAAATAAACCT 1063 Query 9529 ATCCCTACCAGGAGGGTTCTCAAAACATTATTAGAGAAAGAAGCTACAGATTGGCCGAAG 9588 || | || | || || | | || ||| | ||| ||||| || ||||| || Sbjct 1064 ATACTAACATGTAGAGTATTAATTTCAACTTTAAATAAAACTGCTACCGACTGGCCCAAA 1123 Query 9589 TTCCTAGAAAGAGTAGATAAATACGGGTTGGATTGGGAATCCTTGGTAATTGGCCTTAAA 9648 || || |||||||| || | || || ||| | || || |||| || | | | Sbjct 1124 TTTTTAAAAAGAGTAAATGATTAGGGATTGAGTAAAGATGAGTTAATAATAGGGTTGAGA 1183 Query 9649 GGGAAAGAGAGGGAATTGAAAGAAGCCGGACGATTCTTTTCCTTAATGTCCTGGGAATTA 9708 | |||||||| | || ||||| || | |||||||| || ||||| ||| ||| Sbjct 1184 GCTAAAGAGAGAGG-TTAAAAGAGAACGTA-GATTCTTTGTATTGATGTCTTGGACTTTA 1241 Query 9709 AGGGAATATTTCGTTGTAACTGAATTACTGATTAAACAACAT-TATGTAAAGTTGTTCAA 9767 || || ||||| || |||| || | || | || |||| || | | || || || Sbjct 1242 AGAGATTATTTTGTCATAACAGAGTACCTTTTAAAGGAACACATACTTCCA-TTATTTAA 1300 Query 9768 AGGTTTGACCATGGCAGATGATCTCCAAACTGTCATAAAGAAAATGCTTGATA 9820 | || | || ||||| |||||| | || | | ||||||||||| |||| Sbjct 1301 AAGTATAACTATGGCTGATGATATAGTTACCTTAACCAAGAAAATGCTAGATA 1353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46160464997899