Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_028246.1 Length=14627 Score E Sequences producing significant alignments: (Bits) Value seq5447 145 7e-31 seq64995 125 7e-25 seq3346 109 5e-20 >seq5447 Length=4366 Score = 145 bits (160), Expect = 7e-31 Identities = 520/806 (65%), Gaps = 23/806 (3%) Strand=Plus/Minus Query 9540 TGTTTTGATATACCTGACATGATCGATCCAAGTGTGATTTATAGTGACAAAAGTCATTCA 9599 |||||||| || || || |||| || || ||| ||||||||||| ||||||||||| Sbjct 2993 TGTTTTGAAATTCCAGAAGTGATTGAACCCAGTTATATTTATAGTGATAAAAGTCATTCT 2934 Query 9600 TATGATAGATCAGAAGTAATCAGG---TTTATACAAGATCCAGCTATTAAAAGAATACCA 9656 | | |||| || |||| | || | | | |||| || ||| |||||| Sbjct 2933 TTAACAAAATCACAATTAATAAATCACTTAAGATTATATCC---TAATAAGCCTATACCA 2877 Query 9657 ACCAAGAGAGTTTTATCTACTATGATT--TCCAAGACTGCAAAAAATTGGCCTGAATTTT 9714 | | | ||| ||||||| | | || | ||| | | | ||||||||| ||||| | Sbjct 2876 TCTCACAAAGTCTTATCTATTTTTATAAATTCAAAAGAG--ACAAATTGGCCGGAATTCT 2819 Query 9715 TAAAAGAAATTAATGATCACGGTTTGGAGTGGGAAAAACTGGTAATAGGACTAAAAGCTA 9774 || || | || |||||| | || || || || || |||| ||||| ||||||| Sbjct 2818 TACAAAAGATAAATGATGAAGGATTAGATAATGATAATTACATAATTGGACTCAAAGCTA 2759 Query 9775 AAGAGAGAGAATTAAAGATAGAAGGTAGAtttttttCATTGATGTCATATGACATGAGGG 9834 |||| |||||| |||| ||| ||||||| |||||| | ||||| | || ||||| | Sbjct 2758 AAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATGTCTTGGGAGATGAGAG 2699 Query 9835 ATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACCATTATTCAAAGGAT 9894 | || ||||| | || ||||| | || ||||||||||| |||| | || || | | Sbjct 2698 AATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTTAATAGTT 2639 Query 9895 TGACCATGGCTGATGATCAAAATACAGTAGTAAAGAAAATGCTCAAAGTTTCTAAAGGTC 9954 ||||| |||| |||||| | ||| | | ||||| ||| | | | || | | | Sbjct 2638 TGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATGGATATATCGAGATCCC 2579 Query 9955 AAGGGCTAACAGATTATAAAGAGATAACATTTGCTAATCA-CTTGGATTATGAGAAGTGG 10013 || || ||| ||| || |||| || || || |||||| || ||| Sbjct 2578 AAATTGACACTGATACAAAATCAATTTGTATTGCCAACCACCTCGGATTACTCAAAATGG 2519 Query 10014 AATAATTATCAAAGGAGGGAATCAAACGGTCCGGTGTTCAGAGTAATGGGCCAGTTTTTA 10073 || || ||||||| ||| | ||| || || || ||||||||| | ||| || Sbjct 2518 AACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTAATGGGGAAATTTGTA 2459 Query 10074 GGTCTACCTCACTTAATAGAAAGAACTCACGAGTTCTTTGAAAATAGTCTAATTTATTAC 10133 || || ||||| | | || || ||| | ||| |||| | ||||||| ||| Sbjct 2458 GGGTATCCCAACTTATTTACCCGCACGCATGAGATTTTTCAAAAGTCTTTAATTTACTAC 2399 Query 10134 AATGGCCGACCTGAT----TTAATGTATGTCAGAAATAAAGTTGTACACTCCAAAGGTGA 10189 | |||| ||| ||| ||| || | || || | | || |||| || Sbjct 2398 TGAGATAGACCAGATCAACTTATAGTA-ACCACAGATGGAGAAATCGAGTCACAAGGGGA 2340 Query 10190 TGACATCGTTTGCTGGGAAGGACAAAAAGGAGGATTAGAGGGTCTAAGACAAAAAGGATG 10249 | |||| ||| | || ||| | || || ||||| || || || ||||| ||||| Sbjct 2339 T---TGTTTTTGTTGGAATGGGCAAGATGGGGGTTTAGAAGGGCTGAGGCAAAAGGGATG 2283 Query 10250 GAGTGTCCTTAATTGCCTAATGATTGAGAGAGAATCAAAGATTCGGAACACCCAAATCGG 10309 |||| | |||||| || | || || |||| || ||||| || || || | || Sbjct 2282 GAGTATAGTTAATTTACTGGTTATAGATAGAG----TAAAATTCGAAATACAAAAGTTGG 2227 Query 10310 CTTATTGGCCCAGGGAGACAACCAAG 10335 | ||||| |||||||| || |||| Sbjct 2226 AGTGTTGGCTCAGGGAGATAATCAAG 2201 >seq64995 Length=2604 Score = 125 bits (138), Expect = 7e-25 Identities = 448/686 (65%), Gaps = 22/686 (3%) Strand=Plus/Plus Query 9351 ATATTAGCTAGTGATTTATCTTTTAAGGTGTTGAGGGAGATGTTTTT-AAAGAAGAAGAA 9409 ||||||||||| |||| ||| ||| | |||| ||| | || || |||||| ||||| Sbjct 764 ATATTAGCTAGCAATTTTGCTTATAAAATATTGAAGGATAAATTCTTCAAAGAA-AAGAA 822 Query 9410 ATGGTTCGTTGACCATAAGAAAATGGATAAAAATCATATACTTTACCCATTCATTAAAGG 9469 |||||| || ||| || ||| | | || | || | || | || || | Sbjct 823 ATGGTTTGTAGACAATTGAAAATTACCTGAAGACCACCCATTTAAATTTTTTATCGATTA 882 Query 9470 GAACACTTGGCCCACTCAATCAGTTTTAGATAAATTTGGTGATCACTGGGAATCTTTGCC 9529 |||| ||||||| | ||| ||| || || | |||| || ||| | ||||| Sbjct 883 CAACATTTGGCCCTCCCAACAAGTCATAAATGAGCATGGTTATATATGGCATAAGTTGCC 942 Query 9530 TATAATTAAATGTTTTGATATACCTGACATGATCGATCCAAGTGTGATTTATAGTGACAA 9589 ||||| ||||| |||||||| || || ||| | ||||| | | || |||| ||| || Sbjct 943 AATAATCAAATGCTTTGATATTCCAGATATGTTTGATCCTACTAATATATATAATGATAA 1002 Query 9590 AAGTCATTCATATGATAGAT-CAGAAGTAATCAGGTTTATACAAG---ATCCAGCTATTA 9645 ||||| | ||||| || ||||| | | | ||||||| ||||| | || Sbjct 1003 GAGTCACTT-TATGACTTATACAGAACTGGTGAAACATATACAATGAAATCCA---AATA 1058 Query 9646 AAAGAATACCAACCAAGAGAGTTTTA---TCTACTATGATTTCCAAGACTGCAAAAAATT 9702 || |||| ||| ||||| ||| || ||| | | | || ||||| | | | Sbjct 1059 AACCTATACTAACATGTAGAGTATTAATTTCAACTTTAAAT---AAAACTGCTACCGACT 1115 Query 9703 GGCCTGAATTTTTAAAAGAAATTAATGATCACGGTTTGGAGTGG-GAAAAACTGGTAATA 9761 |||| ||||||||||| | | |||||| | || ||| ||| || | | ||||| Sbjct 1116 GGCCCAAATTTTTAAAAAGAGTAAATGATTAGGGATTG-AGTAAAGATGAGTTAATAATA 1174 Query 9762 GGACTAAAAGCTAAAGAGAGAGAATTAAAGATAGAAGGTAGAtttttttCATTGATGTCA 9821 || | | |||||||||||||| | ||||| ||| ||||||| ||| ||||||||| Sbjct 1175 GGGTTGAGAGCTAAAGAGAGAGGTTAAAAGA--GAACGTAGATTCTTTGTATTGATGTCT 1232 Query 9822 TATGACATGAGG-GATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACC 9880 | ||| | | | ||||| || || || || || || | |||| || | | || Sbjct 1233 TG-GACTTTAAGAGATTATTTTGTCATAACAGAGTACCTTTTAAAGGAACACATACTTCC 1291 Query 9881 ATTATTCAAAGGATTGACCATGGCTGATGATCAAAATACAGTAGTAAAGAAAATGCTCAA 9940 |||||| ||| | | || |||||||||||| | ||| || ||||||||||| | Sbjct 1292 ATTATTTAAAAGTATAACTATGGCTGATGATATAGTTACCTTAACCAAGAAAATGCTAGA 1351 Query 9941 AGTTTCTAAAGGTCAAGGGCTAACAGATTATAAAGAGATAACATTTGCTAATCACTTGGA 10000 || || ||| ||||| | |||| |||| |||| ||||| || Sbjct 1352 TAAATCGAAGCAACAATCATCAACAGCTGGTAAAACGATATGTATTGCGAATCATGCTGA 1411 Query 10001 TTATGAGAAGTGGAATAATTATCAAA 10026 |||| ||||||||||| |||||| Sbjct 1412 TTATAGCAAGTGGAATAACCATCAAA 1437 >seq3346 Length=1548 Score = 109 bits (120), Expect = 5e-20 Identities = 324/486 (67%), Gaps = 19/486 (4%) Strand=Plus/Minus Query 10187 TGATGACATCGT---TTGCTGGGAAGGACAAAAAGGAGGATTAGAGGGTCTAAGACAAAA 10243 |||||||| | | ||||||||| || ||| | || ||| | || || |||||||||| Sbjct 846 TGATGACAACCTATTTTGCTGGGATGGTCAAGATGGGGGACTTGAAGGATTAAGACAAAA 787 Query 10244 AGGATGGAGTGTCCTTAATTGCCTAATGATTGAGAGAGAATCAAAGATTCGGAACACCCA 10303 || |||||| | |||||| || || || || |||||| || | || ||||| | Sbjct 786 GGGGTGGAGTATTGTTAATTTACTGATAATAGATAGAGAAAGCAAATTACGAAACACAAA 727 Query 10304 AATCGGCTTATTGGCCCAGGGAGACAACCAAGTAATCACAACACATTATAAAGT-TGAGC 10362 ||| || |||| || || |||||||||||||| || || || || ||||| || Sbjct 726 AATTGGGGTATTAGCTCAAGGAGACAACCAAGTCATATGCACCCAATACAAAGTCCGA-- 669 Query 10363 CATATCAA--AATGACAATGAATTAATCTTCCACATCA--ATAATATTATATCGAATAAT 10418 | ||||| || |||||| ||| | | ||| | || | |||||| || ||| Sbjct 668 -AAATCAAGGCATCCGAATGAAATAAAGT--CTCATTATGATGAAATTATAAAAAACAAT 612 Query 10419 AATCGTATAATGGATGCAATAATAGAAGGAACAGAAAAGTTGGGCTTAAAAATAAACATG 10478 | | | | ||| ||||| |||||||||||| ||| ||||| | | ||| |||| Sbjct 611 AGTGCTGTCATGTCGGCAATTATAGAAGGAACATCAAAATTGGGACTCATAATTAACAAA 552 Query 10479 GATGAGACAATTCAGAGTGCAGATTATATTAA-CTATGGGAAAGTTCCGAT-ATATAGAG 10536 || || || || || | ||| | |||| ||||||||| | || || ||| || | Sbjct 551 GACGAAACTATACAATCTATTAATT-TCTTAATTTATGGGAAAATCCCAATAATAAAG-G 494 Query 10537 GGAATATTCTGGGTTTAAATCAGAAGCGGTGGTCAAGAGTAAATTATGTGAGTAATGATC 10596 || |||| |||| || || || ||| ||||||| | | | | ||||| | Sbjct 493 GGGTTATTAGAAATTTAGATATTAAACGATGGAGTAGAGTAACATGTATAACAAATGACC 434 Query 10597 AGTTGCCATC-ATGCAGCAGTATACTAAACTCTGCATCTACTAATGCATTAACCGTTTGT 10655 || | ||| || || | ||||| |||| | ||||||||||||| | ||| Sbjct 433 AGATATTATCTATTAAG-AATATACAGTCATCTGTTACAGGTAATGCATTAACCATATGT 375 Query 10656 CACTTT 10661 |||||| Sbjct 374 CACTTT 369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46636741522010