Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_028255.1 Length=11003 Score E Sequences producing significant alignments: (Bits) Value seq5447 131 1e-26 >seq5447 Length=4366 Score = 131 bits (144), Expect = 1e-26 Identities = 592/923 (64%), Gaps = 43/923 (5%) Strand=Plus/Minus Query 6105 ACCAATTGGTCTGAGTTCTTGAACCAAATAGACAAGTATGGACTAGACGATGAAGATTTG 6164 || |||||| | || ||||| | | ||| | | | ||| |||| |||| ||| Sbjct 2837 ACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTAC 2778 Query 6165 GTGATTGGTCTCAAAGGAAAAGAGAGAGAATTGAAACTAGCCGGAAGATTCTTTTCCTTG 6224 | ||||| ||||||| ||||| |||||| | ||| || || |||| |||||| | Sbjct 2777 ATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTA 2718 Query 6225 ATGTCTTGGAAATTACGTGAATATTTTGTAATCACGGAATATCTTATCAAAACACACTTT 6284 ||||||||| | | | |||||||| || | || ||||| || || |||| | | | Sbjct 2717 ATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTAC 2658 Query 6285 GTCCCCATGTTCAAGGGACTAACCATGGCAGATGATCTAACTGCTGTCATCaaaaaaaTG 6344 | || | || || | | ||| ||||||||||| | || | | || || || ||| Sbjct 2657 TTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATG 2598 Query 6345 TTGGATACATCCTCAGGTCAAGGATTGGACAAT--TAC-GAGTCCATTTGTATCGCGAAT 6401 |||||| ||| || || ||| |||| | ||| | || |||||||| || || Sbjct 2597 ATGGATATATC--GAGATCCCAAATT-GACACTGATACAAAATCAATTTGTATTGCCAAC 2541 Query 6402 CACAT-TGATTATGAGAAATGGAACAACCATCAACGCAAGGAATCCAATGGGCCTGTATT 6460 ||| | ||||| |||||||||||||||||| | ||| |||| || ||||| Sbjct 2540 CACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATT 2481 Query 6461 TCGTGTGATGGGACAGTTCCTAGGATACCCAAACCTGATTGAGAGGACACACGA-ATTCT 6519 | || ||||| | || |||| || || ||| | || | || || || ||| | Sbjct 2480 TGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTT 2421 Query 6520 TCGAGAAGAGCTTGATCTACTATAATGGACGTCCAG----ACTTA----ATGCAGGTCTC 6571 || | ||| || || ||||| | | |||| ||||| | || | Sbjct 2420 TC-AAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGATG 2362 Query 6572 GGGAAATACCCTCATCAACAGGTCTAATCAATTG-GTCTGCTGGCAGGGACAAGCAGGAG 6630 | ||||| ||| ||| || |||| | || ||| | || |||| || | Sbjct 2361 GAGAAATCGAGTCA-CAAGGGG--------ATTGTTTTTGTTGGAATGGGCAAGATGGGG 2311 Query 6631 GGCTGGAAGGCCTTCGTCAGAAAGGATGGAGCATCCTGAACTTGCTAGTAATCCAAAGAG 6690 | | ||||| || | || || |||||||| || | || || || || || | |||| Sbjct 2310 GTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAGAG 2251 Query 6691 AAGCTAAAGTCCGAAACACAGCAGTCAAGGTGTTGGCACAAGGGGATAATCAAGTGATTT 6750 |||| | ||||| ||| ||| |||||||| || || |||||||||| |||| Sbjct 2250 ----TAAAATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTT 2195 Query 6751 GCACTCAATACAAGACAAAGAAATCTAGAGATGACACAGAG-CTAAGGTCAGCCCT-TAA 6808 | ||||||||||| | |||||| | | | | ||| |||| || | | || Sbjct 2194 GTACTCAATACAAAGTGAGGAAATCCCGTGTTTTTAATGAGACTAA--ACAACATTACAA 2137 Query 6809 GCAGATGGTGTCTAACAATGAAAACATTATGCAGGCAATTAAGGAAGGAACAGGAAAGTT 6868 | || || || ||| | | | | ||| ||||| | |||||| |||||| Sbjct 2136 TGAAATTGTACAAAATAATCAGACCGTCATGTCAGCAATAGCTGCAGGAACCACAAAGTT 2077 Query 6869 GGGCTTGGTTATCAACGATGATGAAACAATGCAGTCAGCGGATTATCTGAAT----TATG 6924 || ||| | |||||| | |||||||| || || || |||| || || |||| Sbjct 2076 AGGTTTGATAATCAACAAAGATGAAACTATTCAATC----TATTAACTTCATCATCTATG 2021 Query 6925 GGAAAATTCCCATCTTTCGCGGGGTGATAAGAGGACTCGAAACTAAAAGATGGTCGCGGG 6984 ||||||| || || || || |||||||| ||| | || | ||| || ||| || | Sbjct 2020 GGAAAATACCTATAATTAAGGGAGTGATAAGGGGATTGGATATTAAGAGGTGGAGTCGTG 1961 Query 6985 TCACATGTGTGACAAATGACCAA 7007 | ||||| | || ||||||||| Sbjct 1960 TAACATGCATAACGAATGACCAA 1938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35056911416164