Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_031215.1 Length=12291 Score E Sequences producing significant alignments: (Bits) Value seq5447 152 4e-33 seq3346 100 2e-17 >seq5447 Length=4366 Score = 152 bits (168), Expect = 4e-33 Identities = 552/847 (65%), Gaps = 34/847 (4%) Strand=Plus/Minus Query 7085 TACCTTTGATCAAGTGTTTTGAAATTCCGGACATGTTTGATCC---TTCGACGCTGTATG 7141 |||| |||| | |||||||||||||| || || |||| || || | | ||| Sbjct 3007 TACCCTTGACCCCTTGTTTTGAAATTCCAGAAGTGATTGAACCCAGTTATA---TTTATA 2951 Query 7142 CAGATAAAAGTCATTCCATGAACAAAGATGAGG-TTATTGATTTCATGAAGAAGA-ATCC 7199 |||||||||||||| | |||||| || | ||| | | | | |||| | |||| Sbjct 2950 GTGATAAAAGTCATTCTTT-AACAAA-ATCACAATTAATAAATCACTTAAGATTATATCC 2893 Query 7200 AGATCGTCCTATTCCATCAAAAAAGGTATTATATACTCTTCTTATGAAGCCC---GCGCG 7256 || ||||| ||||| | || || |||| || || |||| || | | | Sbjct 2892 TAATAAGCCTATACCATCTCACAAAGTCTTATCTA---TTTTTATAAATTCAAAAGAGAC 2836 Query 7257 AAATTGGCCAGCCTTTCTGAAACAAATAGATGAGGAGGGGCTGGATCTCAATGCTCTGAT 7316 ||||||||| | || | || | ||| |||| || || | ||| || | || Sbjct 2835 AAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTACAT 2776 Query 7317 TATCGGGTTGAAAGAGAAGGAGAGAGAGATCAAAATTAACGGTCGTTTTTTCTCTCTGAT 7376 || || | |||| || || ||||| | ||| | ||| | | ||| || || || Sbjct 2775 AATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAAT 2716 Query 7377 GTCATGGGATTTGAGAGATTACTTTGTGATAACTGAATATCTAATCAAGACACATTTTGT 7436 ||| ||||| ||||||| || || ||| | || ||||| || || || | | ||| | Sbjct 2715 GTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTT 2656 Query 7437 CCCTCTTTTCTATGGTCTAACTATGGCCGATGATATGACGACCGTTGTGAGGAAGATGAT 7496 |||||||| || || | || |||| |||||| |||| || | | | ||||||||| Sbjct 2655 ACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGAT 2596 Query 7497 GGAGAATACTAGCGGTCAG---GGCTCTGATGATTATGAACACATCGGAATTGCAAACCA 7553 ||| | | || || | | ||||| | | || || | ||||| ||||| Sbjct 2595 GGATATATCGAGATCCCAAATTGACACTGATACAAA--ATCA-ATTTGTATTGCCAACCA 2539 Query 7554 CCTTG-ATTACGAAAAATGGAACAACCATCAGAGATATCAGTCCACTGAGCCGGTATTTA 7612 ||| | ||||| |||||||||||||||||| ||| | ||| | || |||||| Sbjct 2538 CCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTG 2479 Query 7613 CGGTGATGGGAAAGTTTTTGGGTTATCCTAATTTGATTGCCAGGACCCATGAGTTCTTTG 7672 || ||||| || ||| | || ||||| || || || || | || |||||| | ||| Sbjct 2478 AAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTTTC 2419 Query 7673 AAAAGAGTTTTATCTATCACGGAGGCAGAGCAGATTTAATGAAAGTTGTTAATGGATCGA 7732 ||||| ||| || || || ||| ||| ||||| | | | || | | ||| || Sbjct 2418 AAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAG-TAACCACAGATGGA 2360 Query 7733 TTGTAAATAAGGACCCTGAAAGGATGG--TTTGTTGGCAGGGTCAAAAAGGTGGGCTAGA 7790 |||| | | | | |||| | |||||||| | || ||| | || || |||| Sbjct 2359 ---GAAATCGAGTCAC-AAGGGGATTGTTTTTGTTGGAATGGGCAAGATGGGGGTTTAGA 2304 Query 7791 AGGACTGAGACAGAAAGGGTGGAGTATCCTGAACTTGCTGGTGATAAGAAGAGAAGGTCA 7850 ||| ||||| || || || |||||||| | || || ||||| || ||| | || | Sbjct 2303 AGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTAT----AGATAGAGTAA 2248 Query 7851 AGATAGAAATACAAAAATTCGCTGCCTCGCCCAAGGAGATAATCAGGTCATATGCACACA 7910 | | ||||||||||| || | | || || ||||||||||| | ||| || || || Sbjct 2247 AATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTACTCA 2188 Query 7911 ATACAAA 7917 ||||||| Sbjct 2187 ATACAAA 2181 >seq3346 Length=1548 Score = 100 bits (110), Expect = 2e-17 Identities = 124/167 (74%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 7760 TTTGTTGGCAGGGTCAAAAAGGTGGGCTAGAAGGACTGAGACAGAAAGGGTGGAGTATCC 7819 |||| ||| | |||||| | || || || |||||| | ||||| || ||||||||||| Sbjct 832 TTTGCTGGGATGGTCAAGATGGGGGACTTGAAGGATTAAGACAAAAGGGGTGGAGTATTG 773 Query 7820 TGAACTTGCTGGTGATAAGAAGAGAAGGTCAAGATA-GAAATACAAAAATTCGCTGCCTC 7878 | || || ||| | ||| |||||| | ||| || |||| ||||||||| | | Sbjct 772 TTAATTTACTGATAATAGATAGAGAAAG-CAAATTACGAAACACAAAAATTGGGGTATTA 714 Query 7879 GCCCAAGGAGATAATCAGGTCATATGCACACAATACAAATTACAAAA 7925 || |||||||| || || ||||||||||| ||||||||| | | ||| Sbjct 713 GCTCAAGGAGACAACCAAGTCATATGCACCCAATACAAAGTCCGAAA 667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39174108635460