Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_031236.1 Length=11165 Score E Sequences producing significant alignments: (Bits) Value seq5447 120 2e-23 >seq5447 Length=4366 Score = 120 bits (132), Expect = 2e-23 Identities = 336/505 (67%), Gaps = 13/505 (3%) Strand=Plus/Minus Query 6241 ATCATTGGCCTTAAGGCGAAAGAGAGGGAACTAAAAGCACAGGGAAGATTCTTCTCCCTG 6300 || ||||| || || || ||||| || ||| |||||| | |||| |||| || ||||| Sbjct 2777 ATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTA 2718 Query 6301 CTTTCTTGGGTACTTAGAGAGTATTTTGTCGTAACGGAATATCTTATAAAGATCCATTTC 6360 | ||||||| | ||||| ||||| || || || ||||| || || || | ||| | Sbjct 2717 ATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTAC 2658 Query 6361 CTCCCTCTTTTTAAGGGACTGACTATGGCTGATGACTTGACTACCCTCACCAAGAAGATG 6420 | ||||||||||| | |||| |||| ||||| ||||| || | | ||||||||| Sbjct 2657 TTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATG 2598 Query 6421 CTGGACACCTCCTCGGGTCAAGGGTTAAGTGGATACGACA-AAATTAGTTATGCTAACCA 6479 |||| | | | | | | | | ||||| | | |||| || ||| ||||| Sbjct 2597 ATGGATATAT-CGAGATCCCAAATTGACACTGATACAAAATCAATTTGTATTGCCAACCA 2539 Query 6480 -TTTGGATTATGAGAAGTGGAACAATTATCAAAGGATTGAGTCCAACGGACCGGTCTTCA 6538 | |||||| || |||||||| ||||||| || ||||| || || || Sbjct 2538 CCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTG 2479 Query 6539 AAGTCATGGGACAGTTTCTGGGGTATCCAAATCTTATATA-TCGAACACATGAGTTCTTC 6597 |||| ||||| | ||| | |||||||| || ||||| || || || |||||| | || Sbjct 2478 AAGTAATGGGGAAATTTGTAGGGTATCCCAA-CTTATTTACCCGCACGCATGAGATTTTT 2420 Query 6598 CAGAAAAGCATCATTTACTACAATGATAGGCCGGATTTGATGGTAGTAGAGAACGG--GA 6655 || || | ||||||||| ||||| || ||| | ||||| | || | | Sbjct 2419 CAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTA-ACCACAGATGG 2361 Query 6656 TGATAGTGAATCGCACTGAAGAGAGAGTAGT--GTGGAACGGACAAGCTGGGGGATTGGA 6713 || | || || || | | || || | ||||| || |||| |||||| || || Sbjct 2360 AGAAATCGAGTCACA---AGGGGATTGTTTTTGTTGGAATGGGCAAGATGGGGGTTTAGA 2304 Query 6714 AGGATTAAGGCAGAAAGGATGGAGT 6738 ||| | ||||| || ||||||||| Sbjct 2303 AGGGCTGAGGCAAAAGGGATGGAGT 2279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35574757650268