Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_031240.1 Length=11541 Score E Sequences producing significant alignments: (Bits) Value seq5447 163 2e-36 seq3346 116 3e-22 seq7507 86.0 5e-13 >seq5447 Length=4366 Score = 163 bits (180), Expect = 2e-36 Identities = 557/844 (66%), Gaps = 38/844 (5%) Strand=Plus/Minus Query 6227 TGTTTTGATATACCTGATGTTGTGGA-CCCATCTATTATTTATTCAGATAAAAGTCATTC 6285 |||||||| || || || || | || |||| ||| |||||| |||||||||||||| Sbjct 2993 TGTTTTGAAATTCCAGAAGTGATTGAACCCAGTTAT-ATTTATAGTGATAAAAGTCATTC 2935 Query 6286 CCTCACCAGATCAGAAATAAAAAATTATTTAACCCTTCATCCAAATTCATCGATACCCTC 6345 | || | |||| || ||| |||| | |||| | |||| ||| | ||||| || Sbjct 2934 TTTAACAAAATCACAATTAATAAATCACTTAAGATTATATCCTAATAAGCCTATACCATC 2875 Query 6346 TAAAAAAGTTCTCTCCACACTTTTAGAAAGCCCAAGCA--CAAATTGGCCGGAGTTTCTA 6403 | | ||||| | || | ||||| ||| | || | ||||||||||||| || || Sbjct 2874 TCACAAAGTCTTATCTAT--TTTTATAAATTCAAAAGAGACAAATTGGCCGGAATTCTTA 2817 Query 6404 CAACGAATAAATGATTTTGGGATCTCAATTGAACATTTAGTGATTGGTTTAAAAGAGAAA 6463 ||| ||||||||| || | | ||| ||| | ||||| | |||| ||| Sbjct 2816 CAAAAGATAAATGATGAAGGATTAGATAATGATAATTACATAATTGGACTCAAAGCTAAA 2757 Query 6464 GAAAGAGA-GTTGAAGATAGGAGGAAGATTTTTCGCTTTAATGTCTTGGGAGATTAGAGA 6522 |||||||| || |||| || || |||| ||| | |||||||||||||||| ||||| Sbjct 2756 GAAAGAGAAGTAAAAGA-AGAGGGTAGATATTTTTCCCTAATGTCTTGGGAGATGAGAGA 2698 Query 6523 TTATTTTGTAATGACAGAATATTTAATTAAAACTCATTTTGTGCCTCTCTTTGACGGATT 6582 ||||| || | || ||||| | ||||||| ||| | ||||| ||| | | || Sbjct 2697 ATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTTAATAGTTT 2638 Query 6583 AACAATGGCTGATGATCTAACAACTGTTATCGGAAAGATTTTGCGAAACACTGA-AGGAC 6641 || |||| |||||| | ||||| | || ||||| || || | | || | | Sbjct 2637 GACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATG-GATATATCGAGATCCC 2579 Query 6642 AAGGAGAAGATGGATATGAAAGTGTCACCT----TCGCAGATCATAT-AGATTACGAAAA 6696 || | | | |||| ||| ||| | | || | || | |||||| ||| Sbjct 2578 AAATTG-ACACTGATACAAAA---TCAATTTGTATTGCCAACCACCTCGGATTACTCAAA 2523 Query 6697 ATGGAACAATCATCAGAGAGGAGAGGCAAATAATCCAACTTTCAAAGTTATGGGACAATT 6756 ||||||||| ||||| |||| || || || || ||| || |||| ||||| |||| Sbjct 2522 ATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTTGAAGTAATGGGGAAATT 2463 Query 6757 TTTAGGATACCCCAATTTAATTCAGAGAACTCATGAAATATTTGAGAAATCATGGATATA 6816 | |||| || ||||| ||| || | || ||||| || ||| | || || | || || Sbjct 2462 TGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTTTCAAAAGTCTTTAATTTA 2403 Query 6817 TTA---TAATCGA--AGGGGAGACTTATTGGGCATCGAC-GATAATGACAACCTTTTCAA 6870 || || || || | |||||| | | | || ||| || || | ||| Sbjct 2402 CTACTGAGATAGACCAGATCA-ACTTAT--AGTAACCACAGATGGAGA-AATCGAGTCA- 2348 Query 6871 TAAAGGGCAACACAGAGTTTGTTGGAATGGGCAAGCCGGCGGACTTGAAGGACTCAGGCA 6930 ||||| | | |||||||||||||||||| || || | ||||| || ||||| Sbjct 2347 -CAAGGG---GATTGTTTTTGTTGGAATGGGCAAGATGGGGGTTTAGAAGGGCTGAGGCA 2292 Query 6931 AAAAGGGTGGAGTATAGTAAATCTCTTAATTCTTAAACGGGAGAGCAGAACTGTTAATAC 6990 ||| || ||||||||||| ||| ||| | ||| | | |||| | || | ||||| Sbjct 2291 AAAGGGATGGAGTATAGTTAAT---TTACTGGTTATA-GATAGAGTAAAATTCGAAATAC 2236 Query 6991 CGACATTAAGGTCTTAGCGCAAGGAGATAACCAAGTAATTTGCTCTCGATACAAACTGAG 7050 | || || || || || |||||||| |||| ||||| ||| ||||||| |||| Sbjct 2235 AAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTACTCAATACAAAGTGAG 2176 Query 7051 AAAA 7054 ||| Sbjct 2175 GAAA 2172 >seq3346 Length=1548 Score = 116 bits (128), Expect = 3e-22 Identities = 273/406 (67%), Gaps = 12/406 (3%) Strand=Plus/Minus Query 6888 TTTGTTGGAATGGGCAAGCCGGCGGACTTGAAGGACTCAGGCAAAAAGGGTGGAGTATAG 6947 |||| ||| |||| |||| || |||||||||||| | || ||||| ||||||||||| | Sbjct 832 TTTGCTGGGATGGTCAAGATGGGGGACTTGAAGGATTAAGACAAAAGGGGTGGAGTATTG 773 Query 6948 TAAATCTCTTAATTCTTAAACGGGAGAGCAGAACTGTTAATACCGACATTAAGGTCTTAG 7007 | ||| | | || | | | || |||| | || || | ||| ||| |||| Sbjct 772 TTAATTTACTGATAATAGATAGAGAAAGCAAATTACGAAACACAAAAATTGGGGTATTAG 713 Query 7008 CGCAAGGAGATAACCAAGTAATTTGCTCTCGATACAAACTGAGAAAAAGTCGAAATCCAG 7067 | |||||||| |||||||| || ||| | | ||||||| | ||||| || || || Sbjct 712 CTCAAGGAGACAACCAAGTCATATGCACCCAATACAAAGTCCGAAAA--TC--AAGGCAT 657 Query 7068 ACCAATTATATAACAACCTCAT-----GGATATTAGTAAGAACAATAAAGCTCTAATGGA 7122 | ||| | |||| | ||||| || |||| || ||||||| ||| | ||| Sbjct 656 CCGAATGAAATAA-AGTCTCATTATGATGAAATTATAAAAAACAATAGTGCTGTCATGTC 598 Query 7123 TAGAATTGCGGAAGGAACAGGGAAATTAGGACTAATTATTAATCACGATGAGACCATGAA 7182 |||| ||||||||| ||||| ||||| || ||||| | || || || || | Sbjct 597 GGCAATTATAGAAGGAACATCAAAATTGGGACTCATAATTAACAAAGACGAAACTAT-AC 539 Query 7183 AAGCACGGAATTTCTGAA-TTATGGAAAAACCTGTGTCTTTAGGGGTAATATTAGGAATC 7241 || | ||||||| || |||||| |||| | | | | ||| |||||| ||| Sbjct 538 AATCTATTAATTTCTTAATTTATGGGAAAATCCCAATAATAAAGGGGGTTATTAGAAATT 479 Query 7242 TGGAAACAAAGAGATGGTCTCGGGTAACTTGTGTAACAAATGATCA 7287 | || | || ||||| | | ||||| ||| |||||||||| || Sbjct 478 TAGATATTAAACGATGGAGTAGAGTAACATGTATAACAAATGACCA 433 >seq7507 Length=4973 Score = 86.0 bits (94), Expect = 5e-13 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 6461 AAAGAAAGAGAGTTGAAGATAGGAGGAAGATTTTTCGCTTTAATGTCTTGGGAGATTAGA 6520 |||||||||||||| ||| | ||| || ||||| || ||||||| |||| | || Sbjct 2743 AAAGAAAGAGAGTTCAAGCGTGAAGGTAGGTTTTTTGCATTAATGTTTTGGTGTTTAAGG 2684 Query 6521 GATTATTTTGTAATGACAGAATATTTAATTAAAACTCATTTTGTGCCTCTCTTTGACGGA 6580 || |||||||| || |||||||| ||| | ||| ||| || | | | | ||||| || Sbjct 2683 GAGTATTTTGTGATAACAGAATACTTATTAAAAGAACATATTCTCCTTTTTTTTGATGGC 2624 Query 6581 TTAACAATGGCTGATGA 6597 |||| ||||| ||||| Sbjct 2623 ATAACTATGGCAGATGA 2607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36776672366460