Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_031301.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq5447 196 3e-46 seq64995 98.7 7e-17 seq59951 86.0 4e-13 seq3346 84.2 2e-12 >seq5447 Length=4366 Score = 196 bits (216), Expect = 3e-46 Identities = 736/1131 (65%), Gaps = 55/1131 (5%) Strand=Plus/Minus Query 5770 TCGACATTGGGGACATCCATTTATTGATTATCTACTAGGATTGGAAGCACTTCATACACA 5829 |||||||| |||||||| | || |||||| | |||||| | | ||| || | | Sbjct 3282 TCGACATTTTGGACATCCTATAATAGATTATAAAAAAGGATTAGCAAAACTATATG-AGA 3224 Query 5830 AGTACA---TCTACCAAAACGTATAGATGAAAATTATGCCAAATTACTAGGAAGTGATCT 5886 | ||| | || |||| ||||||| ||||||||| | ||| ||| ||||||| | Sbjct 3223 A-TACGCATTGTAAGAAAAA-TATAGATACAAATTATGCAGAGTTATTAGCAAGTGATTT 3166 Query 5887 TGCATATTTGGTATTAAAGAAGAAATTTACCG--AAGAAAAGAAATGGTATGT------A 5938 ||| || || | | || |||||| ||||||| | |||| ||| | Sbjct 3165 GGCACATCGTATACTGCAAAATCAATTTAAAATTAAGAAAA--AGTGGTTTGTTAATAAA 3108 Query 5939 GATCTAACCAAAATAGAACAAAATCATCCTCTATATAAACATATTCAAGAGAATACATGG 5998 ||||| | | ||||| ||| |||||||| | | || ||||||| ||| Sbjct 3107 GATCTTATGGAGATAGA------TCACCCTCTATACCCATTTGTTGCTGAGAATATCTGG 3054 Query 5999 CCAACTCCAAAACAAATTGAGGACTTTGGAGATAAATGGAATGAGTTGCCTTTAACAAAA 6058 || ||||| ||| | ||| || || | ||| | | || || || || Sbjct 3053 CCTACTCCTAAAGTGGTATCAGACACTGAAGGTCTTTGGCCTAAATTACCCTTGACCCCT 2994 Query 6059 TGTTTTGATATCCCTGATATAATTGATCCCAGTTTACTTTATTCAGATAAGAGTCACTCT 6118 |||||||| || || || | ||||| ||||||| ||||| ||||| ||||| ||| Sbjct 2993 TGTTTTGAAATTCCAGAAGTGATTGAACCCAGTTATATTTATAGTGATAAAAGTCATTCT 2934 Query 6119 ATGAATAGGGATGAAGTTATTAATCATGTTTCAAGGTATCCAAATGTCCCTATTCCAACA 6178 | | | || | || ||||| | | ||||| ||| ||||| ||| | Sbjct 2933 TTAACAAAATCACAATTAATAAATCACTTAAGATTATATCCTAATAAGCCTATACCATCT 2874 Query 6179 AAAAAGGTCTTAGATACATTACTACATACTAAAAGTACCAATTGGCCTGTGTTTTTACAA 6238 | || |||||| || || || || | ||| || |||||||| | || |||||| Sbjct 2873 CACAAAGTCTTATCTATTTTTATAAATTCAAAAGAGACAAATTGGCCGGAATTCTTACAA 2814 Query 6239 GAAATTAACGATCATGGATTACCAAGAAATTCTAAAATTATTGGCTTGAAGGGAAAGGAA 6298 | || || ||| | |||||| | || | | || ||||| | || | || ||| Sbjct 2813 AAGATAAATGATGAAGGATTAGATAATGATAATTACATAATTGGACTCAAAGCTAAAGAA 2754 Query 6299 CGTGAAGTTAAGAAAAAAGGTCGTTTCTTTTCTCTAATGTCATGGATGTTGCGAGAATAT 6358 | ||||| || || | ||| | | ||||| |||||||| ||| | || |||||||| Sbjct 2753 AGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATGTCTTGGGAGATGAGAGAATAT 2694 Query 6359 TTTGTGATAACAGAATATTTAATCAAGGAGAATTACGTTCCTCTGTTTAGTGGATTGACA 6418 || ||| | || ||||| | || || | ||||| | ||||| |||| | | ||||| Sbjct 2693 TTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTTAATAGTTTGACC 2634 Query 6419 ATGGCTGATGATTTGACAACTGTCATATCAAAATTGTTAGATAGGAGTCAGGGA---CAA 6475 |||| |||||||||||||| | || || || | |||| || | || ||| Sbjct 2633 GTGGCAGATGATTTGACAACATTGATTAAGAAGATGATGGATA--TATC-GAGATCCCAA 2577 Query 6476 GGTGGTAAAGATTACACTAAT--ATTTGTATCGCAAATCATAT-TGACTATGAGAAATGG 6532 || | || |||| ||| |||||||| || || || | || || |||||| Sbjct 2576 ATTGACACTGA-TACA-AAATCAATTTGTATTGCCAACCACCTCGGATTACTCAAAATGG 2519 Query 6533 AACAACCATCAAAGA---AAAGCTGCAACTGATCCAGTTTTCAAGGTCATGGGAGAGTTC 6589 ||||||||||||||| |||| |||| | ||||| || | || ||||| | || Sbjct 2518 AACAACCATCAAAGAGCCGAAGC--CAAC-AACCCAGTATTTGAAGTAATGGGGAAATTT 2462 Query 6590 TTAGGATATCCCAACTTATTCACAAGAACTCACGAATTCTTTCAAGAAAGTC--TAATTT 6647 |||| |||||||||||||| || | || || || | ||||| |||||| |||||| Sbjct 2461 GTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTTTCA--AAAGTCTTTAATTT 2404 Query 6648 ACTACAATGGACGACCAGATTTGATGCGTGTCAACAAAGACAGCTTAACAAAT---GCAA 6704 ||||| | |||||||| | | | | || |||| | | |||| | | Sbjct 2403 ACTACTGAGATAGACCAGAT---CAACTTAT-AGTAACCACAGATGGAGAAATCGAGTCA 2348 Query 6705 CAAATCAAAT-AGTATGTTGGGAAGGTCAAGAAGGTGGATTAGAAGGATTGAGACAAAAG 6763 ||| | | | |||||| | || ||||| || || |||||||| |||| |||||| Sbjct 2347 CAAGGGGATTGTTTTTGTTGGAATGGGCAAGATGGGGGTTTAGAAGGGCTGAGGCAAAAG 2288 Query 6764 GGATGGACAACAGTAGGATTATTGATGATAAGACGAGAGGCTAGAGTTCGAAACACAACG 6823 ||||||| | ||| ||| || | ||| || || || | ||||||| |||| Sbjct 2287 GGATGGAGTATAGTTAATTTACTGGTTATA----GATAGAGTAAAATTCGAAATACAAAA 2232 Query 6824 GTCAAAATTTTAGCACAAGGAGATAATCAAGTGATTTGCACTCAATACAAA 6874 || | | || || || ||||||||||||| ||||| |||||||||||| Sbjct 2231 GTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTACTCAATACAAA 2181 >seq64995 Length=2604 Score = 98.7 bits (108), Expect = 7e-17 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 7316 TATAAAATCTTATCATTGTATTTAGATCCTTCATTGGGTGGTGCTTGTGGAACATCATTA 7375 |||||||| | | || ||| | || ||||| || || || | ||||||||||||| Sbjct 2212 TATAAAATTATTTATTTATATCTGGACCCTTCTTTAGGGGGATTATCTGGAACATCATTA 2271 Query 7376 ACAAGATTTTTGACCAGAGCATTTCCTGATCCTGTTACAGAGAGTTTATCATTCTGGAA 7434 |||||||||| | ||| ||||||||||||| ||||||| ||||||||||| ||||| Sbjct 2272 ACAAGATTTTAAATAAGATCATTTCCTGATCCAATTACAGAAAGTTTATCATTTTGGAA 2330 >seq59951 Length=10275 Score = 86.0 bits (94), Expect = 4e-13 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 7596 TTAAGGCGGAGATCAAAAAATCTATGCAACTGAATGTTAGTACTATCAAAAATGAGGTGA 7655 |||| | ||| ||||||||| | || | ||| | ||||| |||||||| || | Sbjct 1743 TTAAAGAGGAAATCAAAAAACATTTGTATAACAATATAGAGACTATTAAAAATGAAGTTA 1802 Query 7656 TTAGCGATGCCATTATTTATTTAAACCAAGAGGAAGAAACATTGTTGAATTTTCTGATGA 7715 ||| || ||||| ||| ||| | | ||||||| | | |||| ||| || Sbjct 1803 TTAAATCTGTAATTATATATGCAAAACGTAATGAAGAAAGAATTAACAATTATCTATGGA 1862 Query 7716 GTATTAAACCTTTATTCCCTCGATTTTTAAGTGAATTTAAATCTGCAACATTTATTGGGA 7775 | | || || ||||| || |||| ||||||||||||| |||| ||||| || | | Sbjct 1863 GAGTCAACCCATTATTTCCGAGATTCATAAGTGAATTTAAGGCTGCTACATTCATAAGAA 1922 Query 7776 TTACTGAAAATTTGATTGGATTATTTCAAAATTCTAGAACAATAAGAACA 7825 | || | | | |||||||||||| ||||| ||| || ||||||||| Sbjct 1923 TCTCTAATTCTGTCATTGGATTATTTGAAAATGCTAAGACTATAAGAACA 1972 Score = 78.8 bits (86), Expect = 7e-11 Identities = 91/120 (76%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 7316 TATAAAATCTTATCATTGTATTTAGATCCTTCATTGGGTGGTGCTTG-TGGAACATCATT 7374 |||||||| | | || ||||||||||| ||| | ||||| ||| | |||||| || | Sbjct 1466 TATAAAATACTTTATTTATATTTAGATCCGTCACTTGGTGG-GCTAGCTGGAACTTCTCT 1524 Query 7375 AACAAGATTTTTGACCAGAGCATTTCCTGATCCTGTTACAGAGAGTTTATCATTCTGGAA 7434 ||| ||||||| | ||| ||||||||||||| |||| || || | ||||| ||||| Sbjct 1525 AACGCGATTTTTAATTAGATCATTTCCTGATCCGATTACTGAAAGCCTCTCATTTTGGAA 1584 >seq3346 Length=1548 Score = 84.2 bits (92), Expect = 2e-12 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 6719 TGTTGGGAAGGTCAAGAAGGTGGATTAGAAGGATTGAGACAAAAGGGATGGACAACAGTA 6778 || ||||| |||||||| || ||| | |||||||| ||||||||||| |||| | || Sbjct 830 TGCTGGGATGGTCAAGATGGGGGACTTGAAGGATTAAGACAAAAGGGGTGGAGTATTGTT 771 Query 6779 GGATTATTGATGATAAGACGAGAGGCTAGAGTTCGAAACACAACGGTCAAAATTTTAGCA 6838 ||| |||| ||| |||| | | | |||||||||| | | ||||| Sbjct 770 AATTTACTGATAATAGATAGAGAAAGCAAATTACGAAACACAAAAATTGGGGTATTAGCT 711 Query 6839 CAAGGAGATAATCAAGTGATTTGCACTCAATACAAA 6874 |||||||| || ||||| || ||||| ||||||||| Sbjct 710 CAAGGAGACAACCAAGTCATATGCACCCAATACAAA 675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35376569585364